Squash CI Bugs #7
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download chopper.ply to repo add 2805.csv to repo Remove curl move files to data folder adding random package
| @@ -343,8 +343,8 @@ library(plotly) | |||
| # Sys.setenv('MAPBOX_TOKEN' = 'your mapbox token') | |||
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| # read in wind turbines and farms data | |||
| df_wind = read.csv('https://plot.ly/~datasets/2805.csv') | |||
| df_farms = read.csv('https://plot.ly/~jackp/17256.csv') | |||
| df_wind = read.csv('data/2805.csv') | |||
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Why must we in-line this one and not the next one? Seems odd
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The output of the command df_wind = read.csv('https://plot.ly/~datasets/2805.csv') is:
df_wind = read.csv('https://plot.ly/~datasets/2805.csv')
*** caught segfault ***
address 0x10b966000, cause 'memory not mapped'
Traceback:
1: scan(file = file, what = what, sep = sep, quote = quote, dec = dec, nmax = nrows, skip = 0, na.strings = na.strings, quiet = TRUE, fill = fill, strip.white = strip.white, blank.lines.skip = blank.lines.skip, multi.line = FALSE, comment.char = comment.char, allowEscapes = allowEscapes, flush = flush, encoding = encoding, skipNul = skipNul)
2: read.table(file = file, header = header, sep = sep, quote = quote, dec = dec, fill = fill, comment.char = comment.char, ...)
3: read.csv("https://plot.ly/~datasets/2805.csv")
Inlining solves the error, which does not appear for df_farms.
| download.file(plyFile, dest) | ||
| } | ||
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| dest <- "data/chopper.ply" |
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Any idea why this must be inlined and no other files? Just the download.file command doesn’t work?
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I’m fine with inlining, just curious about when we must vs can just continue as was
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When trying to access the file at the URL, the following error is thrown:
trying URL 'http://people.sc.fsu.edu/~jburkardt/data/ply/chopper.ply'
Quitting from lines 73-106 (2016-06-17-3d-tri-surf.Rmd)
Error in download.file(plyFile, dest) :
cannot open URL 'http://people.sc.fsu.edu/~jburkardt/data/ply/chopper.ply'
Calls: <Anonymous> ... withCallingHandlers -> withVisible -> eval -> eval -> download.file
In addition: Warning messages:
1: In rgl.init(initValue, onlyNULL) : RGL: unable to open X11 display
2: 'rgl_init' failed, running with rgl.useNULL = TRUE
3: In download.file(plyFile, dest) :
URL 'https://people.sc.fsu.edu/~jburkardt/data/ply/chopper.ply': status was 'SSL connect error'
I believe SSL is set up correctly in the container, as libcurl4-openssl-dev and ca-certificates are both installed. Seems like an issue with the server?
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This reverts commit 788a206.
closes #6
The purpose of this PR is to squash bugs which are preventing the
masterbranch from passing CI.This involves:
adding
chopper.plyand2085.csvdata files to the repo filesystem instead of making API calls at build timeadding
randompackage toDESCRIPTIONCI build steps renamed for clarity.