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Fix broken format_node due to missing inspect import. #1528

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Jul 12, 2016
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2 changes: 2 additions & 0 deletions nipype/pipeline/engine/base.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,8 @@
"""

from __future__ import absolute_import

from future import standard_library
standard_library.install_aliases()
from builtins import object
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2 changes: 2 additions & 0 deletions nipype/pipeline/engine/nodes.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,8 @@
"""

from __future__ import absolute_import

from future import standard_library
standard_library.install_aliases()
from builtins import range
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12 changes: 10 additions & 2 deletions nipype/pipeline/engine/utils.py
Original file line number Diff line number Diff line change
Expand Up @@ -5,6 +5,8 @@
"""Utility routines for workflow graphs
"""

from __future__ import absolute_import

from future import standard_library
standard_library.install_aliases()

Expand All @@ -22,6 +24,10 @@
from copy import deepcopy
from glob import glob
from collections import defaultdict
try:
from inspect import signature
except ImportError:
from funcsigs import signature
import os
import re
import numpy as np
Expand Down Expand Up @@ -115,15 +121,17 @@ def _write_inputs(node):

def format_node(node, format='python', include_config=False):
"""Format a node in a given output syntax."""
from .nodes import MapNode
lines = []
name = node.fullname.replace('.', '_')
if format == 'python':
klass = node._interface
importline = 'from %s import %s' % (klass.__module__,
klass.__class__.__name__)
comment = '# Node: %s' % node.fullname
spec = inspect.signature(node._interface.__init__)
args = spec.args[1:]
spec = signature(node._interface.__init__)
args = [p.name for p in spec.parameters.values()]
args = args[1:]
if args:
filled_args = []
for arg in args:
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2 changes: 2 additions & 0 deletions nipype/pipeline/engine/workflows.py
Original file line number Diff line number Diff line change
Expand Up @@ -15,6 +15,8 @@

"""

from __future__ import absolute_import

from future import standard_library
standard_library.install_aliases()
from builtins import range
Expand Down