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Description
Summary
when calling randomise with f_only=True, nipypes interfaces appends --f_only instead of --fonly. This is incorrect and prevents the call from working.
The offending line is here, where the last bit should be argstr="--fonly"
Actual behavior
appending --fonly to the randomise call.
Expected behavior
--f_only is appended, breaking the call.
Script/Workflow details
fsl_randomise = mem.cache(fsl.Randomise)
randomise_results = fsl_randomise(
in_file=`fourdimage.nii`,
mask=`mask.nii`,
num_perm=10000,
f_only=True,
**kwargs
)
Platform details:
{'commit_hash': 'c5ce0e2c9',
'commit_source': 'installation',
'networkx_version': '2.5',
'nibabel_version': '3.2.1',
'nipype_version': '1.4.2',
'numpy_version': '1.20.1',
'pkg_path': '/usr/local/miniconda/lib/python3.7/site-packages/nipype',
'scipy_version': '1.6.1',
'sys_executable': '/usr/local/miniconda/bin/python',
'sys_platform': 'linux',
'sys_version': '3.7.4 (default, Aug 13 2019, 20:35:49) \n[GCC 7.3.0]',
'traits_version': '6.2.0'}
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