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[algorithms] Overlap interface revision #925

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Merged
merged 2 commits into from
Oct 6, 2014

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oesteban
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  • Now it accepts not only binary files, also ROI files with multiple
    labels.
  • Volumes can be handled in voxel units (as formerly) and mm3
  • Keeps backwards compatibility of outputs and inputs

NOTE: I've tested it with both ROI files and binary files, it'd be very easy to write some regression tests for this

* Now it accepts not only binary files, also ROI files with multiple
  labels.
* Volumes can be handled in voxel units (as formerly) and mm3
* Keeps backwards compatibility of outputs and inputs
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Coverage Status

Coverage decreased (-0.07%) when pulling 173d6f3 on oesteban:enh/OverlapOfROIs into 5215480 on nipy:master.

@satra
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satra commented Sep 14, 2014

@oesteban - can you add a real test for this? in algorithms we prefer real tests.

@oesteban
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@satra yes, I will try to add them ASAP 👍

@chrisgorgo
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Pending merge on the tests.

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Coverage Status

Coverage increased (+0.08%) when pulling 8bd261f on oesteban:enh/OverlapOfROIs into 5215480 on nipy:master.

@oesteban
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oesteban commented Oct 2, 2014

I've added some tests. What is annoying is that results are similar (but not very close, 2nd decimal) to the results I get with LabelOverlapMeasures from ANTS.

However, implementation is basically the same it was previously.

chrisgorgo added a commit that referenced this pull request Oct 6, 2014
[algorithms] Overlap interface revision
@chrisgorgo chrisgorgo merged commit 6da8f17 into nipy:master Oct 6, 2014
@oesteban oesteban deleted the enh/OverlapOfROIs branch October 16, 2014 14:50
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4 participants