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[FIX] check for existance of NULL file #2998

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[FIX] check for existance of NULL file #2998

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472b7e8
[FIX] check for existance of NULL file
pndni-builder Aug 13, 2019
1931f6b
add Steven Tilley
pndni-builder Aug 13, 2019
411defe
Bugfix. fix regression bug from 472b7e85
pndni-builder Aug 13, 2019
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5 changes: 5 additions & 0 deletions .zenodo.json
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Original file line number Diff line number Diff line change
Expand Up @@ -676,6 +676,11 @@
"affiliation": "MIT, HMS",
"name": "Ghosh, Satrajit",
"orcid": "0000-0002-5312-6729"
},
{
"affiliation": "Holland Bloorview Kids Rehabilitation Hospital",
"name": "Tilley II, Steven",
"orcid": "0000-0003-4853-5082"
}
],
"keywords": [
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8 changes: 8 additions & 0 deletions nipype/interfaces/ants/registration.py
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Expand Up @@ -1099,6 +1099,14 @@ def _format_registration(self):
if len(moving_masks) > 1 else 0]
else:
moving_mask = 'NULL'
if (fixed_mask == 'NULL' or
isinstance(fixed_mask, list) and 'NULL' in fixed_mask or
moving_mask == 'NULL' or
isinstance(moving_mask, list) and 'NULL' in moving_mask):
print("CURRENT PATH: {}".format(os.getcwd()))
if os.path.exists('NULL'):
raise RuntimeError('NULL used as placeholder for no mask '
'but a file named NULL exists')
retval.append('--masks [ %s, %s ]' % (fixed_mask, moving_mask))
return " ".join(retval)

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