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CI: Test against minimum versions #2576

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7a823f6
CI: Test against minimum versions
effigies May 14, 2018
0d64df6
FIX: Minimum scipy wheels for 3.5, 3.6
effigies May 14, 2018
c6381f0
FIX: Find traceback data if result missing
effigies May 14, 2018
143e18f
DEP: Try scipy>=0.19
effigies May 14, 2018
62e1734
CI: No "fmri" extra
effigies May 14, 2018
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16 changes: 11 additions & 5 deletions .travis.yml
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Original file line number Diff line number Diff line change
Expand Up @@ -10,10 +10,11 @@ python:
- 3.6

env:
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=false NIPYPE_EXTRAS="doc,tests,fmri,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler,duecredit,ssh" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,fmri,profiler" PIP_FLAGS="--pre" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=false NIPYPE_EXTRAS="doc,tests,profiler" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=false NIPYPE_EXTRAS="doc,tests,profiler" MIN_DEP=1 CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,profiler,duecredit,ssh" CI_SKIP_TEST=1
- INSTALL_DEB_DEPENDECIES=true NIPYPE_EXTRAS="doc,tests,profiler" PIP_FLAGS="--pre" CI_SKIP_TEST=1

addons:
apt:
Expand Down Expand Up @@ -49,7 +50,12 @@ before_install:
- travis_retry conda update -q conda
- conda config --add channels conda-forge
- travis_retry conda install -y python=${TRAVIS_PYTHON_VERSION} icu
- travis_retry pip install -r requirements.txt
- if [ "$MIN_DEP" = "1" ]; then
sed -e 's/>=/==/' < requirements.txt > requirements_min.txt;
travis_retry pip install -r requirements_min.txt;
else
travis_retry pip install -r requirements.txt;
fi;
- travis_retry git clone https://github.com/INCF/pybids.git ${HOME}/pybids &&
pip install -e ${HOME}/pybids
- travis_retry pip install codecov
Expand Down
6 changes: 5 additions & 1 deletion nipype/pipeline/plugins/base.py
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Expand Up @@ -224,7 +224,11 @@ def _clean_queue(self, jobid, graph, result=None):
self._status_callback(self.procs[jobid], 'exception')

if str2bool(self._config['execution']['stop_on_first_crash']):
raise RuntimeError("".join(result['traceback']))
if result is None:
tb = '\n'.join(format_exception(*sys.exc_info()))
else:
tb = result['traceback']
raise RuntimeError("".join(tb))
crashfile = self._report_crash(self.procs[jobid], result=result)
if jobid in self.mapnodesubids:
# remove current jobid
Expand Down
4 changes: 2 additions & 2 deletions requirements.txt
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@@ -1,5 +1,5 @@
numpy>=1.9.0
scipy>=0.14
numpy>=1.9.3
scipy>=0.19.1
networkx>=1.9
traits>=4.6
python-dateutil>=2.2
Expand Down