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Add transform to handle training data with empty ground truth boxes #1256

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Merged
merged 12 commits into from
Mar 25, 2023
Merged

Add transform to handle training data with empty ground truth boxes #1256

merged 12 commits into from
Mar 25, 2023

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Can-Zhao
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@Can-Zhao Can-Zhao commented Mar 18, 2023

Fixes #1197 .

Description

Add transform to handle training data with empty ground truth boxes
Add verbose choice for training script

Checks

  • Avoid including large-size files in the PR.
  • Clean up long text outputs from code cells in the notebook.
  • For security purposes, please check the contents and remove any sensitive info such as user names and private key.
  • Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the ./figure folder
  • Notebook runs automatically ./runner.sh -t <path to .ipynb file>

Can-Zhao and others added 11 commits March 18, 2023 06:00
…ose choice during training

Signed-off-by: Can Zhao <canz@nvidia.com>
Signed-off-by: Can Zhao <canz@nvidia.com>
Signed-off-by: Can Zhao <canz@nvidia.com>
Signed-off-by: Can Zhao <canz@nvidia.com>
Signed-off-by: Can Zhao <canz@nvidia.com>
Signed-off-by: Can Zhao <canz@nvidia.com>
@Can-Zhao Can-Zhao marked this pull request as ready for review March 24, 2023 19:55
@wyli wyli enabled auto-merge (squash) March 25, 2023 12:18
@wyli wyli merged commit bb9ccb7 into Project-MONAI:main Mar 25, 2023
@Can-Zhao Can-Zhao deleted the negbox branch March 25, 2023 19:27
boneseva pushed a commit to boneseva/MONAI-tutorials that referenced this pull request Apr 21, 2024
…roject-MONAI#1256)

Fixes Project-MONAI#1197 .

### Description
Add transform to handle training data with empty ground truth boxes
Add verbose choice for training script

### Checks
<!--- Put an `x` in all the boxes that apply, and remove the not
applicable items -->
- [x] Avoid including large-size files in the PR.
- [ ] Clean up long text outputs from code cells in the notebook.
- [x] For security purposes, please check the contents and remove any
sensitive info such as user names and private key.
- [ ] Ensure (1) hyperlinks and markdown anchors are working (2) use
relative paths for tutorial repo files (3) put figure and graphs in the
`./figure` folder
- [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>`

---------
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2 participants