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add tutorial to run nnunet via runner class #1216
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wyli
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Project-MONAI:main
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dongyang0122:add_nnunetv2_runner_tutorial
Mar 21, 2023
Merged
add tutorial to run nnunet via runner class #1216
wyli
merged 31 commits into
Project-MONAI:main
from
dongyang0122:add_nnunetv2_runner_tutorial
Mar 21, 2023
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Signed-off-by: dongy <dongy@nvidia.com>
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wyli
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Mar 21, 2023
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Signed-off-by: dongy <dongy@nvidia.com> ### Description Adding tutorial to run steps in nnunetv2 via runner class. this closes Project-MONAI/MONAI#6037 ### Checks <!--- Put an `x` in all the boxes that apply, and remove the not applicable items --> - [ ] Avoid including large-size files in the PR. - [ ] Clean up long text outputs from code cells in the notebook. - [ ] For security purposes, please check the contents and remove any sensitive info such as user names and private key. - [ ] Ensure (1) hyperlinks and markdown anchors are working (2) use relative paths for tutorial repo files (3) put figure and graphs in the `./figure` folder - [ ] Notebook runs automatically `./runner.sh -t <path to .ipynb file>` --------- Signed-off-by: dongy <dongy@nvidia.com>
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Signed-off-by: dongy dongy@nvidia.com
Description
Adding tutorial to run steps in nnunetv2 via runner class.
this closes Project-MONAI/MONAI#6037
Checks
./figure
folder./runner.sh -t <path to .ipynb file>