Open
Description
[2025-05-01T13:49:17.542Z] + python -m tests.integration.test_integration_nnunetv2_runner
[2025-05-01T13:49:18.474Z]
[2025-05-01T13:49:18.474Z] A module that was compiled using NumPy 1.x cannot be run in
[2025-05-01T13:49:18.474Z] NumPy 2.2.5 as it may crash. To support both 1.x and 2.x
[2025-05-01T13:49:18.474Z] versions of NumPy, modules must be compiled with NumPy 2.0.
[2025-05-01T13:49:18.474Z] Some module may need to rebuild instead e.g. with 'pybind11>=2.12'.
[2025-05-01T13:49:18.474Z]
[2025-05-01T13:49:18.474Z] If you are a user of the module, the easiest solution will be to
[2025-05-01T13:49:18.474Z] downgrade to 'numpy<2' or try to upgrade the affected module.
[2025-05-01T13:49:18.474Z] We expect that some modules will need time to support NumPy 2.
[2025-05-01T13:49:18.474Z]
[2025-05-01T13:49:18.474Z] Traceback (most recent call last): File "/usr/lib/python3.10/runpy.py", line 196, in _run_module_as_main
[2025-05-01T13:49:18.474Z] return _run_code(code, main_globals, None,
[2025-05-01T13:49:18.474Z] File "/usr/lib/python3.10/runpy.py", line 86, in _run_code
[2025-05-01T13:49:18.474Z] exec(code, run_globals)
[2025-05-01T13:49:18.474Z] File "/home/jenkins/agent/workspace/Monai-notebooks/MONAI/tests/integration/test_integration_nnunetv2_runner.py", line 21, in <module>
[2025-05-01T13:49:18.474Z] from monai.apps.nnunet import nnUNetV2Runner
[2025-05-01T13:49:18.474Z] File "/home/jenkins/agent/workspace/Monai-notebooks/MONAI/monai/__init__.py", line 83, in <module>
[2025-05-01T13:49:18.474Z] from .utils.module import load_submodules # noqa: E402
[2025-05-01T13:49:18.474Z] File "/home/jenkins/agent/workspace/Monai-notebooks/MONAI/monai/utils/__init__.py", line 16, in <module>
[2025-05-01T13:49:18.474Z] from .deprecate_utils import DeprecatedError, deprecated, deprecated_arg, deprecated_arg_default
[2025-05-01T13:49:18.474Z] File "/home/jenkins/agent/workspace/Monai-notebooks/MONAI/monai/utils/deprecate_utils.py", line 22, in <module>
[2025-05-01T13:49:18.474Z] from monai.utils.module import version_leq
[2025-05-01T13:49:18.474Z] File "/home/jenkins/agent/workspace/Monai-notebooks/MONAI/monai/utils/module.py", line 30, in <module>
[2025-05-01T13:49:18.474Z] import torch
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/__init__.py", line 2479, in <module>
[2025-05-01T13:49:18.474Z] from torch import (
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/export/__init__.py", line 64, in <module>
[2025-05-01T13:49:18.474Z] from .dynamic_shapes import Constraint, Dim, dims, ShapesCollection
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/export/dynamic_shapes.py", line 22, in <module>
[2025-05-01T13:49:18.474Z] from .exported_program import ExportedProgram
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/export/exported_program.py", line 27, in <module>
[2025-05-01T13:49:18.474Z] from torch._higher_order_ops.utils import autograd_not_implemented
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/_higher_order_ops/__init__.py", line 1, in <module>
[2025-05-01T13:49:18.474Z] from torch._higher_order_ops.cond import cond
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/_higher_order_ops/cond.py", line 6, in <module>
[2025-05-01T13:49:18.474Z] import torch._subclasses.functional_tensor
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/_subclasses/functional_tensor.py", line 44, in <module>
[2025-05-01T13:49:18.474Z] class FunctionalTensor(torch.Tensor):
[2025-05-01T13:49:18.474Z] File "/usr/local/lib/python3.10/dist-packages/torch/_subclasses/functional_tensor.py", line 271, in FunctionalTensor
[2025-05-01T13:49:18.474Z] cpu = _conversion_method_template(device=torch.device("cpu"))
[2025-05-01T13:49:18.474Z] /usr/local/lib/python3.10/dist-packages/torch/_subclasses/functional_tensor.py:271: UserWarning: Failed to initialize NumPy: _ARRAY_API not found (Triggered internally at /opt/pytorch/pytorch/torch/csrc/utils/tensor_numpy.cpp:84.)
[2025-05-01T13:49:18.474Z] cpu = _conversion_method_template(device=torch.device("cpu"))