From 3d7b4939e7a6fdefb8d369b298140da274c69142 Mon Sep 17 00:00:00 2001 From: Aadish Jain Date: Mon, 16 Dec 2024 04:54:13 +0000 Subject: [PATCH 1/4] feat(t-pdf): adding all the functionality required by t pdf --- .../@stdlib/stats/base/dists/t/pdf/README.md | 95 +++++++++ .../base/dists/t/pdf/benchmark/benchmark.js | 28 ++- .../dists/t/pdf/benchmark/benchmark.native.js | 70 +++++++ .../base/dists/t/pdf/benchmark/c/Makefile | 146 ++++++++++++++ .../base/dists/t/pdf/benchmark/c/benchmark.c | 140 +++++++++++++ .../stats/base/dists/t/pdf/binding.gyp | 170 ++++++++++++++++ .../base/dists/t/pdf/examples/c/Makefile | 146 ++++++++++++++ .../base/dists/t/pdf/examples/c/example.c | 40 ++++ .../stats/base/dists/t/pdf/include.gypi | 53 +++++ .../include/stdlib/stats/base/dists/t/pdf.h | 38 ++++ .../stats/base/dists/t/pdf/lib/native.js | 67 +++++++ .../stats/base/dists/t/pdf/manifest.json | 85 ++++++++ .../stats/base/dists/t/pdf/package.json | 3 + .../stats/base/dists/t/pdf/src/Makefile | 70 +++++++ .../stats/base/dists/t/pdf/src/addon.c | 23 +++ .../@stdlib/stats/base/dists/t/pdf/src/main.c | 45 +++++ .../base/dists/t/pdf/test/test.native.js | 188 ++++++++++++++++++ 17 files changed, 1397 insertions(+), 10 deletions(-) create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/manifest.json create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c create mode 100644 lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/README.md b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/README.md index 11934002a59d..66129a6ea87b 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/README.md +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/README.md @@ -132,6 +132,101 @@ for ( i = 0; i < 10; i++ ) { + + +* * * + +
+ +## C APIs + + + +
+ +
+ + + + + +
+ +### Usage + +```c +#include "stdlib/stats/base/dists/t/pdf.h" +``` + +#### stdlib_base_dists_t_pdf( x, v ) + +Evaluates the [probability density function][pdf] (PDF) for a [Student's t][t-distribution] distribution with degrees of freedom `v`. + +```c +double out = stdlib_base_dists_t_pdf( 0.5, 2.0 ); +// returns ~0.352 +``` + +The function accepts the following arguments: + +- **x**: `[in] double` input value. +- **v**: `[in] double` degree of freedom. + +```c +double stdlib_base_dists_t_pdf( const double x, const double v ); +``` + +
+ + + + + +
+ +
+ + + + + +
+ +### Examples + +```c +#include "stdlib/stats/base/dists/t/pdf.h" +#include +#include + +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v*(max-min) ); +} + +int main( void ) { + double x; + double v; + double y; + int i; + + for ( i = 0; i < 25; i++ ) { + x = random_uniform( -10.0, 10.0 ); + v = random_uniform( 0.1, 10.0 ); + y = stdlib_base_dists_t_pdf( x, v ); + printf( "x: %lf, v: %lf, f(x;v): %lf\n", x, v, y ); + } +} +``` + +
+ + + +
+ + +
diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js index d9b401f0547c..97fc0ef32374 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2018 The Stdlib Authors. +* Copyright (c) 2024 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. @@ -21,7 +21,8 @@ // MODULES // var bench = require( '@stdlib/bench' ); -var ceil = require( '@stdlib/math/base/special/ceil' ); +var Float64Array = require( '@stdlib/array/float64' ); +var uniform = require( '@stdlib/random/array/uniform' ); var randu = require( '@stdlib/random/base/randu' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var pkg = require( './../package.json' ).name; @@ -31,16 +32,23 @@ var pdf = require( './../lib' ); // MAIN // bench( pkg, function benchmark( b ) { - var v; + var len; var x; + var v; var y; var i; + len = 100; + x = new Float64Array( len ); + v = new Float64Array( len ); + for ( i = 0; i < len; i++ ) { + x[ i ] = ( randu() * 20.0 ) - 10.0; + v[ i ] = ( randu() * 10.0 ) + 0.1; + } + b.tic(); for ( i = 0; i < b.iterations; i++ ) { - x = ( randu()*100.0 ) - 100; - v = ceil( randu()*100.0 ); - y = pdf( x, v ); + y = pdf( x[ i % len ], v[ i % len ] ); if ( isnan( y ) ) { b.fail( 'should not return NaN' ); } @@ -53,20 +61,20 @@ bench( pkg, function benchmark( b ) { b.end(); }); -bench( pkg+':factory', function benchmark( b ) { +bench( pkg + ':factory', function benchmark( b ) { var mypdf; var v; var x; var y; var i; - v = 3.0; + v = 2.0; mypdf = pdf.factory( v ); + x = uniform( 100, -2.0, 2.0 ); b.tic(); for ( i = 0; i < b.iterations; i++ ) { - x = ( randu()*100.0 ) - 50.0; - y = mypdf( x ); + y = mypdf( x[ i % x.length ] ); if ( isnan( y ) ) { b.fail( 'should not return NaN' ); } diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js new file mode 100644 index 000000000000..41e3ff839857 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js @@ -0,0 +1,70 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2024 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var resolve = require( 'path' ).resolve; +var bench = require( '@stdlib/bench' ); +var Float64Array = require( '@stdlib/array/float64' ); +var randu = require( '@stdlib/random/base/randu' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var tryRequire = require( '@stdlib/utils/try-require' ); +var pkg = require( './../package.json' ).name; + + +// VARIABLES // + +var pdf = tryRequire( resolve( __dirname, './../lib/native.js' ) ); +var opts = { + 'skip': ( pdf instanceof Error ) +}; + + +// MAIN // + +bench( pkg + '::native', opts, function benchmark( b ) { + var len; + var x; + var v; + var y; + var i; + + len = 100; + x = new Float64Array( len ); + v = new Float64Array( len ); + for ( i = 0; i < len; i++ ) { + x[ i ] = ( randu() * 20.0 ) - 10.0; + v[ i ] = ( randu() * 10.0 ) + 0.1; + } + + b.tic(); + for ( i = 0; i < b.iterations; i++ ) { + y = pdf( x[ i % len ], v[ i % len ] ); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + } + b.toc(); + if ( isnan( y ) ) { + b.fail( 'should not return NaN' ); + } + b.pass( 'benchmark finished' ); + b.end(); +}); diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile new file mode 100644 index 000000000000..f69e9da2b4d3 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2024 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := benchmark.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled benchmarks. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c new file mode 100644 index 000000000000..3ec29d4ee07b --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c @@ -0,0 +1,140 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2024 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include +#include "stdlib/stats/base/dists/t/pdf.h" +#include +#include +#include +#include + +#define NAME "t-pdf" +#define ITERATIONS 1000000 +#define REPEATS 3 + +/** +* Prints the TAP version. +*/ +static void print_version( void ) { + printf( "TAP version 13\n" ); +} + +/** +* Prints the TAP summary. +* +* @param total total number of tests +* @param passing total number of passing tests +*/ +static void print_summary( int total, int passing ) { + printf( "#\n" ); + printf( "1..%d\n", total ); // TAP plan + printf( "# total %d\n", total ); + printf( "# pass %d\n", passing ); + printf( "#\n" ); + printf( "# ok\n" ); +} + +/** +* Prints benchmarks results. +* +* @param elapsed elapsed time in seconds +*/ +static void print_results( double elapsed ) { + double rate = (double)ITERATIONS / elapsed; + printf( " ---\n" ); + printf( " iterations: %d\n", ITERATIONS ); + printf( " elapsed: %0.9f\n", elapsed ); + printf( " rate: %0.9f\n", rate ); + printf( " ...\n" ); +} + +/** +* Returns a clock time. +* +* @return clock time +*/ +static double tic( void ) { + struct timeval now; + gettimeofday( &now, NULL ); + return (double)now.tv_sec + (double)now.tv_usec / 1.0e6; +} + +/** +* Generates a random number on the interval [min,max). +* +* @param min minimum value (inclusive) +* @param max maximum value (exclusive) +* @return random number +*/ +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v * ( max - min ) ); +} + +/** +* Runs a benchmark. +* +* @return elapsed time in seconds +*/ +static double benchmark( void ) { + double elapsed; + double x[ 100 ]; + double v[ 100 ]; + double y; + double t; + int i; + + for ( i = 0; i < 100; i++ ) { + x[ i ] = random_uniform( -10.0, 10.0 ); + v[ i ] = random_uniform( 0.1, 10.0 ); + } + + t = tic(); + for ( i = 0; i < ITERATIONS; i++ ) { + y = stdlib_base_dists_t_pdf( x[ i % 100 ], v[ i % 100 ] ); + if ( y != y ) { + printf( "should not return NaN\n" ); + break; + } + } + elapsed = tic() - t; + if ( y != y ) { + printf( "should not return NaN\n" ); + } + return elapsed; +} + +/** +* Main execution sequence. +*/ +int main( void ) { + double elapsed; + int i; + + // Use the current time to seed the random number generator: + srand( time( NULL ) ); + + print_version(); + for ( i = 0; i < REPEATS; i++ ) { + printf( "# c::%s\n", NAME ); + elapsed = benchmark(); + print_results( elapsed ); + printf( "ok %d benchmark finished\n", i + 1 ); + } + print_summary( REPEATS, REPEATS ); +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp new file mode 100644 index 000000000000..ec3992233442 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp @@ -0,0 +1,170 @@ +# @license Apache-2.0 +# +# Copyright (c) 2024 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A `.gyp` file for building a Node.js native add-on. +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # List of files to include in this file: + 'includes': [ + './include.gypi', + ], + + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Target name should match the add-on export name: + 'addon_target_name%': 'addon', + + # Set variables based on the host OS: + 'conditions': [ + [ + 'OS=="win"', + { + # Define the object file suffix: + 'obj': 'obj', + }, + { + # Define the object file suffix: + 'obj': 'o', + } + ], # end condition (OS=="win") + ], # end conditions + }, # end variables + + # Define compile targets: + 'targets': [ + + # Target to generate an add-on: + { + # The target name should match the add-on export name: + 'target_name': '<(addon_target_name)', + + # Define dependencies: + 'dependencies': [], + + # Define directories which contain relevant include headers: + 'include_dirs': [ + # Local include directory: + '<@(include_dirs)', + ], + + # List of source files: + 'sources': [ + '<@(src_files)', + ], + + # Settings which should be applied when a target's object files are used as linker input: + 'link_settings': { + # Define libraries: + 'libraries': [ + '<@(libraries)', + ], + + # Define library directories: + 'library_dirs': [ + '<@(library_dirs)', + ], + }, + + # C/C++ compiler flags: + 'cflags': [ + # Enable commonly used warning options: + '-Wall', + + # Aggressive optimization: + '-O3', + ], + + # C specific compiler flags: + 'cflags_c': [ + # Specify the C standard to which a program is expected to conform: + '-std=c99', + ], + + # C++ specific compiler flags: + 'cflags_cpp': [ + # Specify the C++ standard to which a program is expected to conform: + '-std=c++11', + ], + + # Linker flags: + 'ldflags': [], + + # Apply conditions based on the host OS: + 'conditions': [ + [ + 'OS=="mac"', + { + # Linker flags: + 'ldflags': [ + '-undefined dynamic_lookup', + '-Wl,-no-pie', + '-Wl,-search_paths_first', + ], + }, + ], # end condition (OS=="mac") + [ + 'OS!="win"', + { + # C/C++ flags: + 'cflags': [ + # Generate platform-independent code: + '-fPIC', + ], + }, + ], # end condition (OS!="win") + ], # end conditions + }, # end target <(addon_target_name) + + # Target to copy a generated add-on to a standard location: + { + 'target_name': 'copy_addon', + + # Declare that the output of this target is not linked: + 'type': 'none', + + # Define dependencies: + 'dependencies': [ + # Require that the add-on be generated before building this target: + '<(addon_target_name)', + ], + + # Define a list of actions: + 'actions': [ + { + 'action_name': 'copy_addon', + 'message': 'Copying addon...', + + # Explicitly list the inputs in the command-line invocation below: + 'inputs': [], + + # Declare the expected outputs: + 'outputs': [ + '<(addon_output_dir)/<(addon_target_name).node', + ], + + # Define the command-line invocation: + 'action': [ + 'cp', + '<(PRODUCT_DIR)/<(addon_target_name).node', + '<(addon_output_dir)/<(addon_target_name).node', + ], + }, + ], # end actions + }, # end target copy_addon + ], # end targets +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile new file mode 100644 index 000000000000..6aed70daf167 --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile @@ -0,0 +1,146 @@ +#/ +# @license Apache-2.0 +# +# Copyright (c) 2024 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. +#/ + +# VARIABLES # + +ifndef VERBOSE + QUIET := @ +else + QUIET := +endif + +# Determine the OS ([1][1], [2][2]). +# +# [1]: https://en.wikipedia.org/wiki/Uname#Examples +# [2]: http://stackoverflow.com/a/27776822/2225624 +OS ?= $(shell uname) +ifneq (, $(findstring MINGW,$(OS))) + OS := WINNT +else +ifneq (, $(findstring MSYS,$(OS))) + OS := WINNT +else +ifneq (, $(findstring CYGWIN,$(OS))) + OS := WINNT +else +ifneq (, $(findstring Windows_NT,$(OS))) + OS := WINNT +endif +endif +endif +endif + +# Define the program used for compiling C source files: +ifdef C_COMPILER + CC := $(C_COMPILER) +else + CC := gcc +endif + +# Define the command-line options when compiling C files: +CFLAGS ?= \ + -std=c99 \ + -O3 \ + -Wall \ + -pedantic + +# Determine whether to generate position independent code ([1][1], [2][2]). +# +# [1]: https://gcc.gnu.org/onlinedocs/gcc/Code-Gen-Options.html#Code-Gen-Options +# [2]: http://stackoverflow.com/questions/5311515/gcc-fpic-option +ifeq ($(OS), WINNT) + fPIC ?= +else + fPIC ?= -fPIC +endif + +# List of includes (e.g., `-I /foo/bar -I /beep/boop/include`): +INCLUDE ?= + +# List of source files: +SOURCE_FILES ?= + +# List of libraries (e.g., `-lopenblas -lpthread`): +LIBRARIES ?= + +# List of library paths (e.g., `-L /foo/bar -L /beep/boop`): +LIBPATH ?= + +# List of C targets: +c_targets := example.out + + +# RULES # + +#/ +# Compiles source files. +# +# @param {string} [C_COMPILER] - C compiler (e.g., `gcc`) +# @param {string} [CFLAGS] - C compiler options +# @param {(string|void)} [fPIC] - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} [INCLUDE] - list of includes (e.g., `-I /foo/bar -I /beep/boop/include`) +# @param {string} [SOURCE_FILES] - list of source files +# @param {string} [LIBPATH] - list of library paths (e.g., `-L /foo/bar -L /beep/boop`) +# @param {string} [LIBRARIES] - list of libraries (e.g., `-lopenblas -lpthread`) +# +# @example +# make +# +# @example +# make all +#/ +all: $(c_targets) + +.PHONY: all + +#/ +# Compiles C source files. +# +# @private +# @param {string} CC - C compiler (e.g., `gcc`) +# @param {string} CFLAGS - C compiler options +# @param {(string|void)} fPIC - compiler flag determining whether to generate position independent code (e.g., `-fPIC`) +# @param {string} INCLUDE - list of includes (e.g., `-I /foo/bar`) +# @param {string} SOURCE_FILES - list of source files +# @param {string} LIBPATH - list of library paths (e.g., `-L /foo/bar`) +# @param {string} LIBRARIES - list of libraries (e.g., `-lopenblas`) +#/ +$(c_targets): %.out: %.c + $(QUIET) $(CC) $(CFLAGS) $(fPIC) $(INCLUDE) -o $@ $(SOURCE_FILES) $< $(LIBPATH) -lm $(LIBRARIES) + +#/ +# Runs compiled examples. +# +# @example +# make run +#/ +run: $(c_targets) + $(QUIET) ./$< + +.PHONY: run + +#/ +# Removes generated files. +# +# @example +# make clean +#/ +clean: + $(QUIET) -rm -f *.o *.out + +.PHONY: clean diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c new file mode 100644 index 000000000000..51d0e1fee43f --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c @@ -0,0 +1,40 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2024 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +#include "stdlib/stats/base/dists/t/pdf.h" +#include +#include + +static double random_uniform( const double min, const double max ) { + double v = (double)rand() / ( (double)RAND_MAX + 1.0 ); + return min + ( v * ( max - min ) ); +} + +int main( void ) { + double x; + double v; + double y; + int i; + + for ( i = 0; i < 25; i++ ) { + x = random_uniform( -10.0, 10.0 ); + v = random_uniform( 0.1, 10.0 ); + y = stdlib_base_dists_t_pdf( x, v ); + printf( "x: %lf, v: %lf, f(x;v): %lf\n", x, v, y ); + } +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi new file mode 100644 index 000000000000..575cb043c0bf --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi @@ -0,0 +1,53 @@ +# @license Apache-2.0 +# +# Copyright (c) 2024 The Stdlib Authors. +# +# Licensed under the Apache License, Version 2.0 (the "License"); +# you may not use this file except in compliance with the License. +# You may obtain a copy of the License at +# +# http://www.apache.org/licenses/LICENSE-2.0 +# +# Unless required by applicable law or agreed to in writing, software +# distributed under the License is distributed on an "AS IS" BASIS, +# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +# See the License for the specific language governing permissions and +# limitations under the License. + +# A GYP include file for building a Node.js native add-on. +# +# Main documentation: +# +# [1]: https://gyp.gsrc.io/docs/InputFormatReference.md +# [2]: https://gyp.gsrc.io/docs/UserDocumentation.md +{ + # Define variables to be used throughout the configuration for all targets: + 'variables': { + # Source directory: + 'src_dir': './src', + + # Include directories: + 'include_dirs': [ + ' + +/** +* Evaluates the probability density function (PDF) for a Student's t-distribution with degrees of freedom `v` at a value `x`. +* +* @param x input value +* @param v degrees of freedom +* @return evaluated PDF +* +* @example +* double y = stdlib_base_dists_t_pdf( 2.0, 1.0 ); +* // returns ~0.063 +*/ +double stdlib_base_dists_t_pdf( const double x, const double v ) { + double betaTerm; + + if ( stdlib_base_is_nan( x ) || stdlib_base_is_nan( v ) || v <= 0.0 ) { + return 0.0 / 0.0; // NaN + } + betaTerm = stdlib_base_sqrt( v ) * stdlib_base_beta( v / 2.0, 0.5 ); + return stdlib_base_pow( v / ( v + stdlib_base_pow( x, 2.0 ) ), ( 1.0 + v ) / 2.0 ) / betaTerm; +} diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js new file mode 100644 index 000000000000..230b6d4c80dc --- /dev/null +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js @@ -0,0 +1,188 @@ +/** +* @license Apache-2.0 +* +* Copyright (c) 2024 The Stdlib Authors. +* +* Licensed under the Apache License, Version 2.0 (the "License"); +* you may not use this file except in compliance with the License. +* You may obtain a copy of the License at +* +* http://www.apache.org/licenses/LICENSE-2.0 +* +* Unless required by applicable law or agreed to in writing, software +* distributed under the License is distributed on an "AS IS" BASIS, +* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. +* See the License for the specific language governing permissions and +* limitations under the License. +*/ + +'use strict'; + +// MODULES // + +var resolve = require( 'path' ).resolve; +var tape = require( 'tape' ); +var tryRequire = require( '@stdlib/utils/try-require' ); +var isnan = require( '@stdlib/math/base/assert/is-nan' ); +var abs = require( '@stdlib/math/base/special/abs' ); +var max = require( '@stdlib/math/base/special/max' ); +var PINF = require( '@stdlib/constants/float64/pinf' ); +var NINF = require( '@stdlib/constants/float64/ninf' ); +var EPS = require( '@stdlib/constants/float64/eps' ); + + +// FIXTURES // + +var smallSmall = require( './fixtures/julia/small_small.json' ); +var smallLarge = require( './fixtures/julia/small_large.json' ); +var largeSmall = require( './fixtures/julia/large_small.json' ); +var largeLarge = require( './fixtures/julia/large_large.json' ); + + +// VARIABLES // + +var pdf = tryRequire( resolve( __dirname, './../lib/native.js' ) ); +var opts = { + 'skip': ( pdf instanceof Error ) +}; + + +// TESTS // + +tape( 'main export is a function', opts, function test( t ) { + t.ok( true, __filename ); + t.strictEqual( typeof pdf, 'function', 'main export is a function' ); + t.end(); +}); + +tape( 'if provided `NaN` for any parameter, the function returns `NaN`', opts, function test( t ) { + var y = pdf( NaN, 1.0 ); + t.equal( isnan( y ), true, 'returns NaN' ); + y = pdf( 0.0, NaN ); + t.equal( isnan( y ), true, 'returns NaN' ); + t.end(); +}); + +tape( 'if provided `+infinity` for `x` and a valid `v`, the function returns `0`', opts, function test( t ) { + var y = pdf( PINF, 1.0 ); + t.equal( y, 0.0, 'returns 0' ); + t.end(); +}); + +tape( 'if provided `-infinity` for `x` and a valid `v`, the function returns `0`', opts, function test( t ) { + var y = pdf( NINF, 1.0 ); + t.equal( y, 0.0, 'returns 0' ); + t.end(); +}); + +tape( 'if provided `v <= 0`, the function returns `NaN`', opts, function test( t ) { + var y; + + y = pdf( 2.0, -1.0 ); + t.equal( isnan( y ), true, 'returns NaN' ); + + y = pdf( 0.0, 0.0 ); + t.equal( isnan( y ), true, 'returns NaN' ); + + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given a small range `v`', opts, function test( t ) { + var expected; + var delta; + var tol; + var x; + var v; + var y; + var i; + + expected = smallSmall.expected; + x = smallSmall.x; + v = smallSmall.v; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], v[ i ] ); + if ( y === expected[ i ] ) { + t.equal( y, expected[ i ], 'x: ' + x[ i ] + ', v: ' + v[ i ] + ', y: ' + y + ', expected: ' + expected[ i ] ); + } else { + delta = abs( y - expected[ i ] ); + tol = max( 2.0 * EPS * abs( expected[ i ] ), 1.0e-14 ); + t.ok( delta <= tol, 'within tolerance. x: ' + x[ i ] + '. v: ' + v[ i ] + '. y: ' + y + '. E: ' + expected[ i ] + '. Δ: ' + delta + '. tol: ' + tol + '.' ); + } + } + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given a medium range `v`', opts, function test( t ) { + var expected; + var delta; + var tol; + var x; + var v; + var y; + var i; + + expected = smallLarge.expected; + x = smallLarge.x; + v = smallLarge.v; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], v[ i ] ); + if ( y === expected[ i ] ) { + t.equal( y, expected[ i ], 'x: ' + x[ i ] + ', v: ' + v[ i ] + ', y: ' + y + ', expected: ' + expected[ i ] ); + } else { + delta = abs( y - expected[ i ] ); + tol = max( 2.0 * EPS * abs( expected[ i ] ), 1.0e-14 ); + t.ok( delta <= tol, 'within tolerance. x: ' + x[ i ] + '. v: ' + v[ i ] + '. y: ' + y + '. E: ' + expected[ i ] + '. Δ: ' + delta + '. tol: ' + tol + '.' ); + } + } + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given a large range `v`', opts, function test( t ) { + var expected; + var delta; + var tol; + var x; + var v; + var y; + var i; + + expected = largeSmall.expected; + x = largeSmall.x; + v = largeSmall.v; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], v[ i ] ); + if ( y === expected[ i ] ) { + t.equal( y, expected[ i ], 'x: ' + x[ i ] + ', v: ' + v[ i ] + ', y: ' + y + ', expected: ' + expected[ i ] ); + } else { + delta = abs( y - expected[ i ] ); + tol = max( 2.0 * EPS * abs( expected[ i ] ), 1.0e-14 ); + t.ok( delta <= tol, 'within tolerance. x: ' + x[ i ] + '. v: ' + v[ i ] + '. y: ' + y + '. E: ' + expected[ i ] + '. Δ: ' + delta + '. tol: ' + tol + '.' ); + } + } + t.end(); +}); + +tape( 'the function evaluates the pdf for `x` given a large range `v`', opts, function test( t ) { + var expected; + var delta; + var tol; + var x; + var v; + var y; + var i; + + expected = largeLarge.expected; + x = largeLarge.x; + v = largeLarge.v; + for ( i = 0; i < x.length; i++ ) { + y = pdf( x[ i ], v[ i ] ); + if ( y === expected[ i ] ) { + t.equal( y, expected[ i ], 'x: ' + x[ i ] + ', v: ' + v[ i ] + ', y: ' + y + ', expected: ' + expected[ i ] ); + } else { + delta = abs( y - expected[ i ] ); + tol = max( 2.0 * EPS * abs( expected[ i ] ), 1.0e-14 ); + t.ok( delta <= tol, 'within tolerance. x: ' + x[ i ] + '. v: ' + v[ i ] + '. y: ' + y + '. E: ' + expected[ i ] + '. Δ: ' + delta + '. tol: ' + tol + '.' ); + } + } + t.end(); +}); From 7f68581d245642e7551f4c49a54f0cbd8d35624d Mon Sep 17 00:00:00 2001 From: stdlib-bot <82920195+stdlib-bot@users.noreply.github.com> Date: Thu, 3 Apr 2025 02:13:45 +0000 Subject: [PATCH 2/4] chore: update copyright years --- .../stats/base/dists/t/pdf/benchmark/benchmark.native.js | 2 +- .../@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile | 2 +- .../@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp | 2 +- .../@stdlib/stats/base/dists/t/pdf/examples/c/Makefile | 2 +- .../@stdlib/stats/base/dists/t/pdf/examples/c/example.c | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi | 2 +- .../base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c | 2 +- lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c | 2 +- .../@stdlib/stats/base/dists/t/pdf/test/test.native.js | 2 +- 13 files changed, 13 insertions(+), 13 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js index 41e3ff839857..642afa08b26d 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile index f69e9da2b4d3..a4bd7b38fd74 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/Makefile @@ -1,7 +1,7 @@ #/ # @license Apache-2.0 # -# Copyright (c) 2024 The Stdlib Authors. +# Copyright (c) 2025 The Stdlib Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c index 3ec29d4ee07b..eaac14624e44 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp index ec3992233442..68a1ca11d160 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/binding.gyp @@ -1,6 +1,6 @@ # @license Apache-2.0 # -# Copyright (c) 2024 The Stdlib Authors. +# Copyright (c) 2025 The Stdlib Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile index 6aed70daf167..25ced822f96a 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/Makefile @@ -1,7 +1,7 @@ #/ # @license Apache-2.0 # -# Copyright (c) 2024 The Stdlib Authors. +# Copyright (c) 2025 The Stdlib Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c index 51d0e1fee43f..00aae6b891d4 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/examples/c/example.c @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi index 575cb043c0bf..ecfaf82a3279 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include.gypi @@ -1,6 +1,6 @@ # @license Apache-2.0 # -# Copyright (c) 2024 The Stdlib Authors. +# Copyright (c) 2025 The Stdlib Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h index a15af29c1c80..74dbc0ce0651 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/include/stdlib/stats/base/dists/t/pdf.h @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js index c9bca2182ba3..cd98b33b9df0 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/lib/native.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile index bcf18aa46655..7733b6180cb4 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/Makefile @@ -1,7 +1,7 @@ #/ # @license Apache-2.0 # -# Copyright (c) 2024 The Stdlib Authors. +# Copyright (c) 2025 The Stdlib Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c index 4b0c7dc2a866..b4a42851d595 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/addon.c @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c index 2da54ace0d2a..b56d54c7e41b 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js index 230b6d4c80dc..5fcc4ecfbed8 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/test/test.native.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2025 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. From b1b69cb3271598aa6b585173d642cf1ebf500e8d Mon Sep 17 00:00:00 2001 From: Philipp Burckhardt Date: Wed, 2 Apr 2025 22:19:57 -0400 Subject: [PATCH 3/4] chore: apply suggestions from code review Signed-off-by: Philipp Burckhardt --- .../stats/base/dists/t/pdf/benchmark/benchmark.js | 13 ++++--------- .../base/dists/t/pdf/benchmark/benchmark.native.js | 10 +++------- .../stats/base/dists/t/pdf/benchmark/c/benchmark.c | 2 +- .../@stdlib/stats/base/dists/t/pdf/src/main.c | 3 +-- 4 files changed, 9 insertions(+), 19 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js index 97fc0ef32374..59896e317a3b 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js @@ -1,7 +1,7 @@ /** * @license Apache-2.0 * -* Copyright (c) 2024 The Stdlib Authors. +* Copyright (c) 2018 The Stdlib Authors. * * Licensed under the Apache License, Version 2.0 (the "License"); * you may not use this file except in compliance with the License. @@ -23,7 +23,6 @@ var bench = require( '@stdlib/bench' ); var Float64Array = require( '@stdlib/array/float64' ); var uniform = require( '@stdlib/random/array/uniform' ); -var randu = require( '@stdlib/random/base/randu' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var pkg = require( './../package.json' ).name; var pdf = require( './../lib' ); @@ -39,12 +38,8 @@ bench( pkg, function benchmark( b ) { var i; len = 100; - x = new Float64Array( len ); - v = new Float64Array( len ); - for ( i = 0; i < len; i++ ) { - x[ i ] = ( randu() * 20.0 ) - 10.0; - v[ i ] = ( randu() * 10.0 ) + 0.1; - } + x = uniform( len, -10.0, 10.0 ); + v = uniform( len, 0.1, 10.0 ); b.tic(); for ( i = 0; i < b.iterations; i++ ) { @@ -61,7 +56,7 @@ bench( pkg, function benchmark( b ) { b.end(); }); -bench( pkg + ':factory', function benchmark( b ) { +bench( pkg+':factory', function benchmark( b ) { var mypdf; var v; var x; diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js index 642afa08b26d..395b675ccbae 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js @@ -23,7 +23,7 @@ var resolve = require( 'path' ).resolve; var bench = require( '@stdlib/bench' ); var Float64Array = require( '@stdlib/array/float64' ); -var randu = require( '@stdlib/random/base/randu' ); +var uniform = require( '@stdlib/random/array/uniform' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var tryRequire = require( '@stdlib/utils/try-require' ); var pkg = require( './../package.json' ).name; @@ -47,12 +47,8 @@ bench( pkg + '::native', opts, function benchmark( b ) { var i; len = 100; - x = new Float64Array( len ); - v = new Float64Array( len ); - for ( i = 0; i < len; i++ ) { - x[ i ] = ( randu() * 20.0 ) - 10.0; - v[ i ] = ( randu() * 10.0 ) + 0.1; - } + x = uniform( len, -10.0, 10.0 ); + v = uniform( len, 0.1, 10.0 ); b.tic(); for ( i = 0; i < b.iterations; i++ ) { diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c index eaac14624e44..09578a34d005 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/c/benchmark.c @@ -16,12 +16,12 @@ * limitations under the License. */ -#include #include "stdlib/stats/base/dists/t/pdf.h" #include #include #include #include +#include #define NAME "t-pdf" #define ITERATIONS 1000000 diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c index b56d54c7e41b..e6ea2b8ff8b5 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/src/main.c @@ -16,12 +16,11 @@ * limitations under the License. */ +#include "stdlib/stats/base/dists/t/pdf.h" #include "stdlib/math/base/assert/is_nan.h" #include "stdlib/math/base/special/beta.h" #include "stdlib/math/base/special/pow.h" #include "stdlib/math/base/special/sqrt.h" -#include "stdlib/stats/base/dists/t/pdf.h" -#include /** * Evaluates the probability density function (PDF) for a Student's t-distribution with degrees of freedom `v` at a value `x`. From 99c3b003320f081e9e260744cb815b3bd933255f Mon Sep 17 00:00:00 2001 From: Philipp Burckhardt Date: Wed, 2 Apr 2025 22:20:41 -0400 Subject: [PATCH 4/4] chore: remove unused require Signed-off-by: Philipp Burckhardt --- .../@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js | 1 - .../@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js | 1 - 2 files changed, 2 deletions(-) diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js index 59896e317a3b..742a5706ac64 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.js @@ -21,7 +21,6 @@ // MODULES // var bench = require( '@stdlib/bench' ); -var Float64Array = require( '@stdlib/array/float64' ); var uniform = require( '@stdlib/random/array/uniform' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var pkg = require( './../package.json' ).name; diff --git a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js index 395b675ccbae..507736a6f825 100644 --- a/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js +++ b/lib/node_modules/@stdlib/stats/base/dists/t/pdf/benchmark/benchmark.native.js @@ -22,7 +22,6 @@ var resolve = require( 'path' ).resolve; var bench = require( '@stdlib/bench' ); -var Float64Array = require( '@stdlib/array/float64' ); var uniform = require( '@stdlib/random/array/uniform' ); var isnan = require( '@stdlib/math/base/assert/is-nan' ); var tryRequire = require( '@stdlib/utils/try-require' );