CPP Transformer Tutorial

hlahkar · hlahkar · commit 133fcf917408 · 2020-10-19T10:49:07.000+05:30
diff --git a/advanced_source/transformer__timeseries_cpp_tutorial/CMakeLists.txt b/advanced_source/transformer__timeseries_cpp_tutorial/CMakeLists.txt
@@ -0,0 +1,8 @@
+cmake_minimum_required(VERSION 3.0 FATAL_ERROR)
+project(custom_ops)
+
+find_package(Torch REQUIRED)
+
+add_executable(transformer_ts transformer_timeseries.cpp)
+target_link_libraries(transformer_ts "${TORCH_LIBRARIES}")
+set_property(TARGET transformer_ts PROPERTY CXX_STANDARD 14)
diff --git a/advanced_source/transformer__timeseries_cpp_tutorial/scheduler.h b/advanced_source/transformer__timeseries_cpp_tutorial/scheduler.h
@@ -0,0 +1,112 @@
+// Copyright 2020-present pytorch-cpp Authors
+#pragma once
+
+#include <torch/torch.h>
+#include <vector>
+#include <algorithm>
+
+namespace scheduler {
+template<typename TOptimizer>
+struct OptimizerOptionsMap {
+};
+
+template<>
+struct OptimizerOptionsMap<torch::optim::Adam> {
+    using type = torch::optim::AdamOptions;
+};
+
+template<>
+struct OptimizerOptionsMap<torch::optim::Adagrad> {
+    using type = torch::optim::AdagradOptions;
+};
+
+template<>
+struct OptimizerOptionsMap<torch::optim::LBFGS> {
+    using type = torch::optim::LBFGSOptions;
+};
+
+template<>
+struct OptimizerOptionsMap<torch::optim::RMSprop> {
+    using type = torch::optim::RMSpropOptions;
+};
+
+template<>
+struct OptimizerOptionsMap<torch::optim::SGD> {
+    using type = torch::optim::SGDOptions;
+};
+
+/**
+ * Learning rate scheduler base.
+ *
+ * Based on the Python implementation at
+ * https://github.com/pytorch/pytorch/blob/master/torch/optim/lr_scheduler.py.
+ * @tparam TOptimizer Optimizer type
+ */
+template<typename TOptimizer>
+class LRScheduler {
+ public:
+    explicit LRScheduler(TOptimizer& optimizer, int64_t last_epoch = -1)
+            : optimizer_(optimizer), last_epoch_(last_epoch), base_lrs(get_current_lr()) {}
+
+    virtual std::vector<double> get_lr() = 0;
+
+    void step() {
+        ++last_epoch_;
+
+        const auto values = get_lr();
+        auto &param_groups = optimizer_.param_groups();
+
+        for (decltype(param_groups.size()) i = 0; i != param_groups.size(); ++i) {
+            dynamic_cast<typename OptimizerOptionsMap<TOptimizer>::type &>(param_groups[i].options()).lr(values[i]);
+        }
+    }
+
+    virtual ~LRScheduler() = default;
+
+ protected:
+    TOptimizer& optimizer_;
+    int64_t last_epoch_;
+    std::vector<double> base_lrs;
+
+    std::vector<double> get_current_lr() {
+        std::vector<double> lrs;
+        lrs.reserve(optimizer_.param_groups().size());
+
+        for (auto &param_group : optimizer_.param_groups()) {
+            lrs.push_back(dynamic_cast<typename
+            OptimizerOptionsMap<TOptimizer>::type &>(param_group.options()).lr());
+        }
+
+        return lrs;
+    }
+};
+
+/**
+ * Step learning rate scheduler.
+ *
+ * Based on the python implementation at
+ * https://github.com/pytorch/pytorch/blob/master/torch/optim/lr_scheduler.py.
+ * @tparam TOptimizer Optimizer type
+ */
+template<typename TOptimizer>
+class StepLR : public LRScheduler<TOptimizer> {
+ public:
+    StepLR(TOptimizer& optimizer, int64_t step_size, double gamma = 0.1, int64_t last_epoch = -1)
+            : LRScheduler<TOptimizer>(optimizer, last_epoch), step_size_(step_size), gamma_(gamma) {}
+
+    std::vector<double> get_lr() override {
+        auto new_lr = this->get_current_lr();
+
+        if (this->last_epoch_ != 0 && (this->last_epoch_ % step_size_ == 0)) {
+            std::transform(new_lr.cbegin(), new_lr.cend(), new_lr.begin(),
+                           [gamma_ = gamma_](auto value) { return value * gamma_; });
+        }
+
+        return new_lr;
+    }
+
+ private:
+    int64_t step_size_;
+    double gamma_;
+};
+}  // namespace scheduler
diff --git a/advanced_source/transformer__timeseries_cpp_tutorial/transformer_timeseries.cpp b/advanced_source/transformer__timeseries_cpp_tutorial/transformer_timeseries.cpp
@@ -0,0 +1,238 @@
+#include <torch/torch.h>
+#include <math.h>
+#include <iostream>
+#include <cmath>
+#include <limits>
+#include <chrono>
+#include <ctime>
+#include <random>
+#include "scheduler.h"
+
+using namespace torch::indexing;
+
+struct PositionalEncodingImpl : torch::nn::Module{
+    PositionalEncodingImpl(){
+
+    }
+    PositionalEncodingImpl(int64_t d_model, int64_t max_len=5000){
+        pe = torch::zeros({max_len, d_model});
+        position = torch::arange(0, max_len,
+            torch::TensorOptions(torch::kFloat32).requires_grad(false));
+        position = position.unsqueeze(1);
+        torch::Tensor temp = torch::arange(0, d_model, 2, torch::TensorOptions(torch::kFloat32).requires_grad(false));
+        div_term = torch::exp(temp * (std::log(10000.0) / d_model));
+
+
+        pe.index_put_({Slice(), Slice(0, None, 2)}, torch::sin(position * div_term));
+        pe.index_put_({Slice(), Slice(1, None, 2)}, torch::cos(position * div_term));
+
+
+        
+        pe = pe.unsqueeze(0).transpose(0, 1);
+        register_parameter("pe", pe);
+        register_parameter("position", position);
+        register_parameter("div_term", div_term);
+        register_buffer("pe", pe);
+    }
+
+    torch::Tensor forward(torch::Tensor x){
+        x = x + pe.index({Slice(0, x.size(0)), Slice()});
+        return x;
+    }
+
+    torch::Tensor pe;
+    torch::Tensor position;
+    torch::Tensor div_term;
+};
+
+TORCH_MODULE(PositionalEncoding);
+
+struct TransformerModel : torch::nn::Module{
+    TransformerModel(int64_t feature_size = 250, int64_t nlayers = 1, float dropout_p=0.1){
+        pos_encoder = PositionalEncoding(feature_size);
+        torch::nn::TransformerEncoderLayerOptions elOptions = 
+            torch::nn::TransformerEncoderLayerOptions(feature_size, 10);
+        torch::nn::TransformerEncoderLayer encoder_layers = torch::nn::TransformerEncoderLayer(
+            elOptions.dropout(dropout_p));
+        torch::nn::TransformerEncoderOptions enOptions = torch::nn::TransformerEncoderOptions(encoder_layers, nlayers);
+        transformer_encoder = torch::nn::TransformerEncoder(enOptions);
+        decoder = torch::nn::Linear(feature_size, 1);
+        register_module("pos_encoder", pos_encoder);
+        register_module("transformer_encoder", transformer_encoder);
+        register_module("decoder", decoder);
+    }
+
+    void init_weights(){
+        float initrange = 0.1;
+        decoder->bias.data().zero_();
+        decoder->weight.data().uniform_(-initrange, initrange);
+    }
+
+    torch::Tensor _generate_square_subsequent_mask(int sz){
+        torch::Tensor mask = (torch::triu(torch::ones({sz, sz})) == 1).transpose(0, 1).to(torch::kFloat32);
+        mask = mask.masked_fill(mask == 0, -std::numeric_limits<float>::infinity()).masked_fill(mask == 1, 0.f);
+        return mask;
+    }
+
+    torch::Tensor forward(torch::Tensor src){
+        if (false == is_mask_generated){
+            torch::Tensor mask = _generate_square_subsequent_mask(src.size(0)).to(src.device());
+            src_mask = mask;
+            is_mask_generated = true;
+        }
+
+        src = pos_encoder(src);
+        torch::Tensor output = transformer_encoder(src, src_mask);
+        output = decoder(output);
+        return output;
+    }
+
+    torch::Tensor src_mask;
+    bool is_mask_generated = false;
+    PositionalEncoding pos_encoder;
+    torch::nn::TransformerEncoder transformer_encoder = nullptr;
+    torch::nn::Linear decoder = nullptr;
+    int64_t ninp;
+};
+
+torch::Tensor create_inout_sequences(torch::Tensor input_data, int64_t tw, int64_t output_window = 1){
+    torch::Tensor temp = torch::empty({input_data.size(0) - tw, 2, tw}, torch::TensorOptions(torch::kFloat32));
+    auto len = input_data.numel();
+    auto max_counter = len - tw;
+    int64_t k = 0;
+    for (auto i = 0; i < max_counter; i++){
+        torch::Tensor train_seq = input_data.index({Slice(i, i + tw)});
+        temp[i][0] = input_data.index({Slice(i, i + tw)});
+        temp[i][1] = input_data.index({Slice(i + output_window, i + tw + output_window)});
+
+    }
+
+    return temp;
+}
+
+std::tuple<torch::Tensor, torch::Tensor> get_data(int64_t output_window = 1){
+    //construct a little toy dataset
+    auto time = torch::arange(0, 400, 0.1);
+    auto amplitude = torch::sin(time) + torch::sin(time * 0.05) + torch::sin(time * 0.12);// + dist(mt);
+
+    
+    //from sklearn.preprocessing import MinMaxScaler
+
+    
+    //looks like normalizing input values curtial for the model
+    //scaler = MinMaxScaler(feature_range=(-1, 1)) 
+    //amplitude = scaler.fit_transform(series.to_numpy().reshape(-1, 1)).reshape(-1)
+    //amplitude = scaler.fit_transform(amplitude.reshape(-1, 1)).reshape(-1)
+    
+    
+    auto samples = 2600;
+
+    auto train_data = amplitude.index({Slice(None, samples)});
+    auto test_data = amplitude.index({Slice(samples, None)});
+
+    //convert our train data into a pytorch train tensor
+    auto input_window = 100;
+
+    auto train_sequence = create_inout_sequences(train_data,input_window);
+    train_sequence = train_sequence.index({Slice(None,-output_window)});
+    
+    auto test_sequence = create_inout_sequences(test_data,input_window);
+    test_sequence = test_sequence.index({Slice(None,-output_window)});
+
+    auto cuda_available = torch::cuda::is_available();
+    torch::Device device(cuda_available ? torch::kCUDA : torch::kCPU);
+
+    return std::make_tuple(train_sequence.to(device),test_sequence.to(device));
+}
+
+std::tuple<torch::Tensor, torch::Tensor> get_batch(torch::Tensor source, int64_t i, int64_t batch_size, int64_t input_window = 100){
+    auto seq_len = std::min(batch_size, source.size(0) - i);
+    
+    auto data = source.index({Slice(i, i + seq_len)});
+    auto input = data.index({Slice(), 0, Slice()});
+    auto target = data.index({Slice(), 1, Slice()});
+    auto temp = input.numel()/100;
+    if (temp > 10)
+        temp = 10;
+    input = torch::reshape(input, {100, temp, 1});
+    target = torch::reshape(target, {100, temp, 1});
+    return std::make_tuple(input, target);
+}
+
+
+void train(TransformerModel model, torch::Tensor train_data, int64_t num_epochs = 100){
+    model.train();
+    auto total_loss = 0.0;
+    auto start_time = std::chrono::system_clock::now();
+    auto batch_size = 10;
+    auto batch = 0;
+
+    torch::nn::MSELoss criterion;
+
+
+    auto learning_rate = 0.005;
+    torch::optim::SGD optimizer(model.parameters(), torch::optim::SGDOptions(learning_rate));
+    scheduler::StepLR<decltype(optimizer)> scheduler(optimizer, 1.0, 0.95);
+
+    for(int64_t i = 0; i <= num_epochs; i++){
+        auto start_time = std::chrono::system_clock::now();
+        std::cout<<"Epoch "<<i<<std::endl;
+        batch = 0;
+        for (int64_t j = 0; j < train_data.size(0); j = j + batch_size, batch++){
+            auto data = get_batch(train_data, j, batch_size);
+            optimizer.zero_grad();
+            auto output = model.forward(std::get<0>(data));
+            
+            auto loss = criterion(output, std::get<1>(data));
+            loss.backward();
+            torch::nn::utils::clip_grad_norm_(model.parameters(), 0.7);
+            optimizer.step();
+            total_loss += loss.item<double>();
+            auto log_interval = int(train_data.size(0)) / (batch_size * 5);
+            if (batch != 0 && 0 == batch % log_interval){
+                auto curr_loss = total_loss / log_interval;
+                auto elapsed = std::chrono::system_clock::now() - start_time;
+                std::cout<<"|epoch "<<i<<" | "<<batch<<"/"<<train_data.size(0)/batch_size;
+                std::cout<<" batches | "<<(elapsed.count() * 10)<<" ms | loss"<<curr_loss<<std::endl;;
+                total_loss = 0;
+                start_time = std::chrono::system_clock::now();
+            }
+        }
+
+        scheduler.step();
+    }
+
+    return;
+}
+
+void evaluate(TransformerModel model, torch::Tensor eval_data){
+    model.eval();
+    auto batch_size = 10;
+    auto total_loss = 0.0;
+    torch::nn::MSELoss criterion;
+
+    std::cout<<"Evaluating:";
+    for (int64_t j = 0; j < eval_data.size(0); j = j + batch_size){
+            auto data = get_batch(eval_data, j, batch_size);
+            auto output = model.forward(std::get<0>(data));
+            auto loss = criterion(output, std::get<1>(data));
+            total_loss += loss.item<double>();
+    }
+
+    std::cout<<"Evaluation Loss: "<<total_loss<<std::endl;
+    return;
+}
+
+int main(){
+    auto cuda_available = torch::cuda::is_available();
+    torch::Device device(cuda_available ? torch::kCUDA : torch::kCPU);
+
+    auto model = TransformerModel();
+    model.to(device);
+
+    auto data = get_data();
+    train(model, std::get<0>(data));
+    evaluate(model, std::get<1>(data));
+
+    return 0;
+}
