🔥 remove pin theano checks, just use requirements.txt

Author: MarcoGorelli

.github/workflows/arviz_compat.yml

@@ -33,6 +33,18 @@ jobs:
           path: ~/conda_pkgs_dir
           key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{
             hashFiles('conda-envs/environment-dev-py38.yml') }}
+      - name: Cache multiple paths
+        uses: actions/cache@v2
+        env:
+          # Increase this value to reset cache if requirements.txt has not changed
+          CACHE_NUMBER: 0
+        with:
+          path: |
+            ~/.cache/pip
+            $RUNNER_TOOL_CACHE/Python/*
+            ~\AppData\Local\pip\Cache
+          key: ${{ runner.os }}-build-${{ matrix.python-version }}-${{
+            hashFiles('requirements.txt') }}
       - uses: conda-incubator/setup-miniconda@v2
         with:
           activate-environment: pymc3-dev-py38

.github/workflows/pytest.yml

@@ -74,6 +74,18 @@ jobs:
           path: ~/conda_pkgs_dir
           key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{
             hashFiles('conda-envs/environment-dev-py36.yml') }}
+      - name: Cache multiple paths
+        uses: actions/cache@v2
+        env:
+          # Increase this value to reset cache if requirements.txt has not changed
+          CACHE_NUMBER: 0
+        with:
+          path: |
+            ~/.cache/pip
+            $RUNNER_TOOL_CACHE/Python/*
+            ~\AppData\Local\pip\Cache
+          key: ${{ runner.os }}-build-${{ matrix.python-version }}-${{
+            hashFiles('requirements.txt') }}
       - uses: conda-incubator/setup-miniconda@v2
         with:
           activate-environment: pymc3-dev-py36

.github/workflows/windows.yml

@@ -32,6 +32,18 @@ jobs:
           path: ~/conda_pkgs_dir
           key: ${{ runner.os }}-conda-${{ env.CACHE_NUMBER }}-${{
             hashFiles('conda-envs/environment-dev-py37.yml') }}
+      - name: Cache multiple paths
+        uses: actions/cache@v2
+        env:
+          # Increase this value to reset cache if requirements.txt has not changed
+          CACHE_NUMBER: 0
+        with:
+          path: |
+            ~/.cache/pip
+            $RUNNER_TOOL_CACHE/Python/*
+            ~\AppData\Local\pip\Cache
+          key: ${{ runner.os }}-build-${{ matrix.python-version }}-${{
+            hashFiles('requirements.txt') }}
       - uses: conda-incubator/setup-miniconda@v2
         with:
           activate-environment: pymc3-dev-py37

.pre-commit-config.yaml

@@ -69,13 +69,6 @@ repos:
       language: python
       name: Sort dependencies in conda envs
       types: [yaml]
-    - id: pin-theano-pymc
-      additional_dependencies: [pyyaml]
-      entry: python scripts/pin_theano.py
-      files: ^conda-envs/
-      language: python
-      name: Check theano-pymc versions match the one in requirements.txt
-      types: [yaml]
     - id: pip-to-conda
       additional_dependencies: [pyyaml]
       entry: python scripts/generate_pip_deps_from_conda.py

conda-envs/environment-dev-py36.yml

@@ -3,29 +3,20 @@ channels:
 - conda-forge
 - defaults
 dependencies:
-- arviz>=0.9
 - contextvars
 - dataclasses
-- dill
-- fastprogress>=0.2
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
 - mkl-service
 - nbsphinx>=0.4
-- numpy>=1.13
 - numpydoc>=0.9
-- pandas>=0.18
-- patsy>=0.5
 - pre-commit>=2.8.0
 - pytest-cov>=2.5
 - pytest>=3.0
 - python-graphviz
 - python=3.6
 - recommonmark>=0.4
-- scipy>=0.18
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
-- theano-pymc=1.0.12
-- typing-extensions>=3.7
 - watermark

conda-envs/environment-dev-py37.yml

@@ -3,27 +3,18 @@ channels:
 - conda-forge
 - defaults
 dependencies:
-- arviz>=0.9
-- dill
-- fastprogress>=0.2
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
 - mkl-service
 - nbsphinx>=0.4
-- numpy>=1.13
 - numpydoc>=0.9
-- pandas>=0.18
-- patsy>=0.5
 - pre-commit>=2.8.0
 - pytest-cov>=2.5
 - pytest>=3.0
 - python-graphviz
 - python=3.7
 - recommonmark>=0.4
-- scipy>=0.18
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
-- theano-pymc=1.0.12
-- typing-extensions>=3.7
 - watermark

conda-envs/environment-dev-py38.yml

@@ -3,27 +3,18 @@ channels:
 - conda-forge
 - defaults
 dependencies:
-- arviz>=0.9
-- dill
-- fastprogress>=0.2
 - h5py>=2.7
 - ipython>=7.16
 - libblas=*=*mkl
 - mkl-service
 - nbsphinx>=0.4
-- numpy>=1.13
 - numpydoc>=0.9
-- pandas>=0.18
-- patsy>=0.5
 - pre-commit>=2.8.0
 - pytest-cov>=2.5
 - pytest>=3.0
 - python-graphviz
 - python=3.8
 - recommonmark>=0.4
-- scipy>=0.18
 - sphinx-autobuild>=0.7
 - sphinx>=1.5
-- theano-pymc=1.0.12
-- typing-extensions>=3.7
 - watermark

requirements-dev.txt

@@ -1,23 +1,14 @@
 # This file is auto-generated from environment-dev-py38.yml, do not modify.
 # See that file for comments about the need/usage of each dependency.
 
-arviz>=0.9
-dill
-fastprogress>=0.2
 h5py>=2.7
 ipython>=7.16
 nbsphinx>=0.4
-numpy>=1.13
 numpydoc>=0.9
-pandas>=0.18
-patsy>=0.5
 pre-commit>=2.8.0
 pytest-cov>=2.5
 pytest>=3.0
 recommonmark>=0.4
-scipy>=0.18
 sphinx-autobuild>=0.7
 sphinx>=1.5
-theano-pymc==1.0.12
-typing-extensions>=3.7
 watermark