diff --git a/.zenodo.json b/.zenodo.json index 51e0460509..e4883ed9e5 100644 --- a/.zenodo.json +++ b/.zenodo.json @@ -574,6 +574,10 @@ { "name": "McDermottroe, Conor" }, + { + "affiliation": "Institute of Imaging & Computer Vision, RWTH Aachen University, Germany", + "name": "Weninger, Leon" + }, { "affiliation": "MIT, HMS", "name": "Ghosh, Satrajit", @@ -587,4 +591,4 @@ ], "license": "Apache-2.0", "upload_type": "software" -} \ No newline at end of file +} diff --git a/nipype/interfaces/fsl/epi.py b/nipype/interfaces/fsl/epi.py index d94b393033..84bd9e8dba 100644 --- a/nipype/interfaces/fsl/epi.py +++ b/nipype/interfaces/fsl/epi.py @@ -947,6 +947,8 @@ class EpiRegOutputSpec(TraitedSpec): structural space') wmseg = File( exists=True, desc='white matter segmentation used in flirt bbr') + seg = File( + exists=True, desc='white matter, gray matter, csf segmentation') wmedge = File(exists=True, desc='white matter edges for visualization') @@ -1013,6 +1015,8 @@ def _list_outputs(self): os.getcwd(), self.inputs.out_base + '_fast_wmedge.nii.gz') outputs['wmseg'] = os.path.join( os.getcwd(), self.inputs.out_base + '_fast_wmseg.nii.gz') + outputs['seg'] = os.path.join( + os.getcwd(), self.inputs.out_base + '_fast_seg.nii.gz') return outputs diff --git a/nipype/interfaces/fsl/tests/test_auto_EpiReg.py b/nipype/interfaces/fsl/tests/test_auto_EpiReg.py index 29a935333e..634a75e376 100644 --- a/nipype/interfaces/fsl/tests/test_auto_EpiReg.py +++ b/nipype/interfaces/fsl/tests/test_auto_EpiReg.py @@ -61,6 +61,7 @@ def test_EpiReg_outputs(): fullwarp=dict(), out_1vol=dict(), out_file=dict(), + seg=dict(), shiftmap=dict(), wmedge=dict(), wmseg=dict(),