From 644b7ed83cfaaa330fa5b2b007b1c1697a58203d Mon Sep 17 00:00:00 2001 From: Dimitri Papadopoulos Date: Wed, 20 Apr 2016 09:14:11 +0200 Subject: [PATCH 1/4] Follow upstream capitalization of MRIcron --- nipype/interfaces/dcm2nii.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/nipype/interfaces/dcm2nii.py b/nipype/interfaces/dcm2nii.py index b78d925517..6b4438b79b 100644 --- a/nipype/interfaces/dcm2nii.py +++ b/nipype/interfaces/dcm2nii.py @@ -49,7 +49,7 @@ class Dcm2niiOutputSpec(TraitedSpec): class Dcm2nii(CommandLine): - """Uses MRICRON's dcm2nii to convert dicom files + """Uses MRIcron's dcm2nii to convert dicom files Examples ======== From 7957c0960774d196d426e9dcccc8a4344e72c625 Mon Sep 17 00:00:00 2001 From: Dimitri Papadopoulos Date: Wed, 20 Apr 2016 10:45:27 +0200 Subject: [PATCH 2/4] Minor typo in comment --- nipype/interfaces/dcm2nii.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/nipype/interfaces/dcm2nii.py b/nipype/interfaces/dcm2nii.py index 6b4438b79b..ebffca6f83 100644 --- a/nipype/interfaces/dcm2nii.py +++ b/nipype/interfaces/dcm2nii.py @@ -107,7 +107,7 @@ def _parse_stdout(self, stdout): if line.startswith("Saving "): out_file = line[len("Saving "):] elif line.startswith("GZip..."): - # for gzipped outpus files are not absolute + # for gzipped output files are not absolute fname = line[len("GZip..."):] if len(files) and os.path.basename(files[-1]) == fname[:-3]: # we are seeing a previously reported conversion From 9924208b8dc089f5df5218aa866c8b9013427547 Mon Sep 17 00:00:00 2001 From: Dimitri Papadopoulos Date: Wed, 20 Apr 2016 09:14:11 +0200 Subject: [PATCH 3/4] Follow upstream capitalization of MRIcron --- nipype/interfaces/dcm2nii.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/nipype/interfaces/dcm2nii.py b/nipype/interfaces/dcm2nii.py index 5c5eb4e134..d2771da36d 100644 --- a/nipype/interfaces/dcm2nii.py +++ b/nipype/interfaces/dcm2nii.py @@ -49,7 +49,7 @@ class Dcm2niiOutputSpec(TraitedSpec): class Dcm2nii(CommandLine): - """Uses MRICRON's dcm2nii to convert dicom files + """Uses MRIcron's dcm2nii to convert dicom files Examples ======== From 5aa402a8fd7a2585045bb32f3133a161b7c283d2 Mon Sep 17 00:00:00 2001 From: Dimitri Papadopoulos Date: Wed, 20 Apr 2016 10:45:27 +0200 Subject: [PATCH 4/4] Minor typo in comment --- nipype/interfaces/dcm2nii.py | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/nipype/interfaces/dcm2nii.py b/nipype/interfaces/dcm2nii.py index d2771da36d..af99c4adb8 100644 --- a/nipype/interfaces/dcm2nii.py +++ b/nipype/interfaces/dcm2nii.py @@ -107,7 +107,7 @@ def _parse_stdout(self, stdout): if line.startswith("Saving "): out_file = line[len("Saving "):] elif line.startswith("GZip..."): - # for gzipped outpus files are not absolute + # for gzipped output files are not absolute fname = line[len("GZip..."):] if len(files) and os.path.basename(files[-1]) == fname[:-3]: # we are seeing a previously reported conversion