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Merge pull request #2424 from salma1601/afni_typos
fix little out_file bugs in afni.Zcat and afni.Merge
2 parents 97f2217 + 834ccac commit b2c7130

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3 files changed

+7
-5
lines changed

3 files changed

+7
-5
lines changed

nipype/interfaces/afni/tests/test_auto_Merge.py

Lines changed: 1 addition & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -32,7 +32,7 @@ def test_Merge_inputs():
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),
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out_file=dict(
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argstr='-prefix %s',
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name_source='in_file',
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name_source='in_files',
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name_template='%s_merge',
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),
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outputtype=dict(),

nipype/interfaces/afni/tests/test_auto_Zcat.py

Lines changed: 2 additions & 1 deletion
Original file line numberDiff line numberDiff line change
@@ -36,7 +36,8 @@ def test_Zcat_inputs():
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),
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out_file=dict(
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argstr='-prefix %s',
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name_template='zcat',
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name_source='in_files',
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name_template='%s_zcat',
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),
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outputtype=dict(),
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terminal_output=dict(

nipype/interfaces/afni/utils.py

Lines changed: 4 additions & 3 deletions
Original file line numberDiff line numberDiff line change
@@ -1434,7 +1434,7 @@ class MergeInputSpec(AFNICommandInputSpec):
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name_template='%s_merge',
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desc='output image file name',
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argstr='-prefix %s',
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name_source='in_file')
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name_source='in_files')
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doall = traits.Bool(
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desc='apply options to all sub-bricks in dataset', argstr='-doall')
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blurfwhm = traits.Int(
@@ -2635,9 +2635,10 @@ class ZcatInputSpec(AFNICommandInputSpec):
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mandatory=True,
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copyfile=False)
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out_file = File(
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name_template='zcat',
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name_template='%s_zcat',
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desc='output dataset prefix name (default \'zcat\')',
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argstr='-prefix %s')
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argstr='-prefix %s',
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name_source='in_files')
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datum = traits.Enum(
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'byte',
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'short',

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