Merge pull request #1273 from nipy/fix/pep8_auto_tests

Updated auto test files to new PEP8 changes

Author: satra

examples/test_spm.py

@@ -15,8 +15,8 @@
 stc.inputs.num_slices = 21
 stc.inputs.time_repetition = 1.0
 stc.inputs.time_acquisition = 2. - 2. / 32
-stc.inputs.slice_order = list(range(21, 0, -1)) 
-stc.inputs.ref_slice = 10 
+stc.inputs.slice_order = list(range(21, 0, -1))
+stc.inputs.ref_slice = 10
 
 realign_estimate = pe.Node(interface=spm.Realign(), name='realign_estimate')
 realign_estimate.inputs.jobtype = "estimate"
@@ -50,8 +50,8 @@
 stc.inputs.num_slices = 21
 stc.inputs.time_repetition = 1.0
 stc.inputs.time_acquisition = 2. - 2. / 32
-stc.inputs.slice_order = list(range(21, 0, -1)) 
-stc.inputs.ref_slice = 10 
+stc.inputs.slice_order = list(range(21, 0, -1))
+stc.inputs.ref_slice = 10
 
 realign_estimate = pe.Node(interface=spm.Realign(), name='realign_estimate')
 realign_estimate.inputs.jobtype = "estimate"

nipype/algorithms/tests/test_auto_AddCSVColumn.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import AddCSVColumn
 
+
 def test_AddCSVColumn_inputs():
     input_map = dict(extra_column_heading=dict(),
     extra_field=dict(),
@@ -16,6 +17,7 @@ def test_AddCSVColumn_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_AddCSVColumn_outputs():
     output_map = dict(csv_file=dict(),
     )
@@ -24,4 +26,3 @@ def test_AddCSVColumn_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_AddCSVRow.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import AddCSVRow
 
+
 def test_AddCSVRow_inputs():
     input_map = dict(_outputs=dict(usedefault=True,
     ),
@@ -17,6 +18,7 @@ def test_AddCSVRow_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_AddCSVRow_outputs():
     output_map = dict(csv_file=dict(),
     )
@@ -25,4 +27,3 @@ def test_AddCSVRow_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_AddNoise.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import AddNoise
 
+
 def test_AddNoise_inputs():
     input_map = dict(bg_dist=dict(mandatory=True,
     usedefault=True,
@@ -22,6 +23,7 @@ def test_AddNoise_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_AddNoise_outputs():
     output_map = dict(out_file=dict(),
     )
@@ -30,4 +32,3 @@ def test_AddNoise_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_ArtifactDetect.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..rapidart import ArtifactDetect
 
+
 def test_ArtifactDetect_inputs():
     input_map = dict(bound_by_brainmask=dict(usedefault=True,
     ),
@@ -50,6 +51,7 @@ def test_ArtifactDetect_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_ArtifactDetect_outputs():
     output_map = dict(displacement_files=dict(),
     intensity_files=dict(),
@@ -64,4 +66,3 @@ def test_ArtifactDetect_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_CalculateNormalizedMoments.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import CalculateNormalizedMoments
 
+
 def test_CalculateNormalizedMoments_inputs():
     input_map = dict(moment=dict(mandatory=True,
     ),
@@ -14,6 +15,7 @@ def test_CalculateNormalizedMoments_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_CalculateNormalizedMoments_outputs():
     output_map = dict(moments=dict(),
     )
@@ -22,4 +24,3 @@ def test_CalculateNormalizedMoments_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_ComputeMeshWarp.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..mesh import ComputeMeshWarp
 
+
 def test_ComputeMeshWarp_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -25,6 +26,7 @@ def test_ComputeMeshWarp_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_ComputeMeshWarp_outputs():
     output_map = dict(distance=dict(),
     out_file=dict(),
@@ -35,4 +37,3 @@ def test_ComputeMeshWarp_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_CreateNifti.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import CreateNifti
 
+
 def test_CreateNifti_inputs():
     input_map = dict(affine=dict(),
     data_file=dict(mandatory=True,
@@ -18,6 +19,7 @@ def test_CreateNifti_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_CreateNifti_outputs():
     output_map = dict(nifti_file=dict(),
     )
@@ -26,4 +28,3 @@ def test_CreateNifti_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_Distance.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import Distance
 
+
 def test_Distance_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -20,6 +21,7 @@ def test_Distance_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_Distance_outputs():
     output_map = dict(distance=dict(),
     histogram=dict(),
@@ -31,4 +33,3 @@ def test_Distance_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_FuzzyOverlap.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import FuzzyOverlap
 
+
 def test_FuzzyOverlap_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -21,6 +22,7 @@ def test_FuzzyOverlap_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_FuzzyOverlap_outputs():
     output_map = dict(class_fdi=dict(),
     class_fji=dict(),
@@ -33,4 +35,3 @@ def test_FuzzyOverlap_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_Gunzip.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import Gunzip
 
+
 def test_Gunzip_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -15,6 +16,7 @@ def test_Gunzip_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_Gunzip_outputs():
     output_map = dict(out_file=dict(),
     )
@@ -23,4 +25,3 @@ def test_Gunzip_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_ICC.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..icc import ICC
 
+
 def test_ICC_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -17,6 +18,7 @@ def test_ICC_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_ICC_outputs():
     output_map = dict(icc_map=dict(),
     session_var_map=dict(),
@@ -27,4 +29,3 @@ def test_ICC_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_Matlab2CSV.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import Matlab2CSV
 
+
 def test_Matlab2CSV_inputs():
     input_map = dict(in_file=dict(mandatory=True,
     ),
@@ -14,6 +15,7 @@ def test_Matlab2CSV_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_Matlab2CSV_outputs():
     output_map = dict(csv_files=dict(),
     )
@@ -22,4 +24,3 @@ def test_Matlab2CSV_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_MergeCSVFiles.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import MergeCSVFiles
 
+
 def test_MergeCSVFiles_inputs():
     input_map = dict(column_headings=dict(),
     extra_column_heading=dict(),
@@ -20,6 +21,7 @@ def test_MergeCSVFiles_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_MergeCSVFiles_outputs():
     output_map = dict(csv_file=dict(),
     )
@@ -28,4 +30,3 @@ def test_MergeCSVFiles_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_MergeROIs.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import MergeROIs
 
+
 def test_MergeROIs_inputs():
     input_map = dict(in_files=dict(),
     in_index=dict(),
@@ -13,6 +14,7 @@ def test_MergeROIs_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_MergeROIs_outputs():
     output_map = dict(merged_file=dict(),
     )
@@ -21,4 +23,3 @@ def test_MergeROIs_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_MeshWarpMaths.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..mesh import MeshWarpMaths
 
+
 def test_MeshWarpMaths_inputs():
     input_map = dict(float_trait=dict(),
     ignore_exception=dict(nohash=True,
@@ -24,6 +25,7 @@ def test_MeshWarpMaths_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_MeshWarpMaths_outputs():
     output_map = dict(out_file=dict(),
     out_warp=dict(),
@@ -33,4 +35,3 @@ def test_MeshWarpMaths_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_ModifyAffine.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import ModifyAffine
 
+
 def test_ModifyAffine_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -17,6 +18,7 @@ def test_ModifyAffine_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_ModifyAffine_outputs():
     output_map = dict(transformed_volumes=dict(),
     )
@@ -25,4 +27,3 @@ def test_ModifyAffine_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_NormalizeProbabilityMapSet.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..misc import NormalizeProbabilityMapSet
 
+
 def test_NormalizeProbabilityMapSet_inputs():
     input_map = dict(in_files=dict(),
     in_mask=dict(),
@@ -12,6 +13,7 @@ def test_NormalizeProbabilityMapSet_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_NormalizeProbabilityMapSet_outputs():
     output_map = dict(out_files=dict(),
     )
@@ -20,4 +22,3 @@ def test_NormalizeProbabilityMapSet_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-

nipype/algorithms/tests/test_auto_P2PDistance.py

@@ -2,6 +2,7 @@
 from ...testing import assert_equal
 from ..mesh import P2PDistance
 
+
 def test_P2PDistance_inputs():
     input_map = dict(ignore_exception=dict(nohash=True,
     usedefault=True,
@@ -25,6 +26,7 @@ def test_P2PDistance_inputs():
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(inputs.traits()[key], metakey), value
 
+
 def test_P2PDistance_outputs():
     output_map = dict(distance=dict(),
     out_file=dict(),
@@ -35,4 +37,3 @@ def test_P2PDistance_outputs():
     for key, metadata in list(output_map.items()):
         for metakey, value in list(metadata.items()):
             yield assert_equal, getattr(outputs.traits()[key], metakey), value
-