@@ -654,25 +654,26 @@ def _list_outputs(self):
654
654
outputs = self .output_spec ().get ()
655
655
outputs ['out_file' ] = os .path .join (os .getcwd (),
656
656
self .inputs .out_base + '.nii.gz' )
657
- outputs ['out_1vol' ] = os .path .join (os .getcwd (),
657
+ if not (isdefined (self .inputs .no_fmapreg ) and self .inputs .no_fmapreg ) and isdefined (self .inputs .fmap ):
658
+ outputs ['out_1vol' ] = os .path .join (os .getcwd (),
658
659
self .inputs .out_base + '_1vol.nii.gz' )
659
- if not (isdefined (self .inputs .no_fmapreg ) and self .inputs .no_fmapreg ) or not isdefined (self .inputs .fmap ):
660
660
outputs ['fmap2str_mat' ] = os .path .join (os .getcwd (),
661
661
self .inputs .out_base + '_fieldmap2str.mat' )
662
662
outputs ['fmap2epi_mat' ] = os .path .join (os .getcwd (),
663
663
self .inputs .out_base + '_fieldmaprads2epi.mat' )
664
664
outputs ['fmap_epi' ] = os .path .join (os .getcwd (),
665
665
self .inputs .out_base + '_fieldmaprads2epi.nii.gz' )
666
666
outputs ['fmap_str' ] = os .path .join (os .getcwd (),
667
- self .inputs .out_base + '_fieldmaprads2str.nii .gz' )
667
+ self .inputs .out_base + '_fieldmaprads2str.ni `i .gz' )
668
668
outputs ['fmapmag_str' ] = os .path .join (os .getcwd (),
669
669
self .inputs .out_base + '_fieldmap2str.nii.gz' )
670
670
outputs ['shiftmap' ] = os .path .join (os .getcwd (),
671
671
self .inputs .out_base + '_fieldmaprads2epi_shift.nii.gz' )
672
672
outputs ['fullwarp' ] = os .path .join (os .getcwd (),
673
673
self .inputs .out_base + '_warp.nii.gz' )
674
- outputs ['epi2str_inv' ] = os .path .join (os .getcwd (),
674
+ outputs ['epi2str_inv' ] = os .path .join (os .getcwd (),
675
675
self .inputs .out_base + '_inv.mat' )
676
+
676
677
outputs ['epi2str_mat' ] = os .path .join (os .getcwd (),
677
678
self .inputs .out_base + '.mat' )
678
679
outputs ['wmedge' ] = os .path .join (os .getcwd (),
0 commit comments