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feat(client-omics): This release adds support for resource policy based cross account S3 access to sequence store read sets.
1 parent 5e46efc commit dbe3f07

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‎clients/client-omics/README.md

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@@ -395,6 +395,14 @@ DeleteRunGroup
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/DeleteRunGroupCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteRunGroupCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteRunGroupCommandOutput/)
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</details>
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<details>
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<summary>
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DeleteS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/DeleteS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/DeleteS3AccessPolicyCommandOutput/)
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</details>
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<details>
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<summary>
@@ -555,6 +563,14 @@ GetRunTask
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/GetRunTaskCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetRunTaskCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetRunTaskCommandOutput/)
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</details>
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<details>
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<summary>
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GetS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/GetS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/GetS3AccessPolicyCommandOutput/)
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</details>
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<details>
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<summary>
@@ -771,6 +787,14 @@ ListWorkflows
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/ListWorkflowsCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/ListWorkflowsCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/ListWorkflowsCommandOutput/)
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</details>
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<details>
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<summary>
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PutS3AccessPolicy
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/PutS3AccessPolicyCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/PutS3AccessPolicyCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/PutS3AccessPolicyCommandOutput/)
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</details>
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<details>
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<summary>
@@ -875,6 +899,14 @@ UpdateRunGroup
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/UpdateRunGroupCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateRunGroupCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateRunGroupCommandOutput/)
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</details>
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<details>
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<summary>
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UpdateSequenceStore
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</summary>
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[Command API Reference](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/client/omics/command/UpdateSequenceStoreCommand/) / [Input](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateSequenceStoreCommandInput/) / [Output](https://docs.aws.amazon.com/AWSJavaScriptSDK/v3/latest/Package/-aws-sdk-client-omics/Interface/UpdateSequenceStoreCommandOutput/)
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</details>
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<details>
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<summary>

‎clients/client-omics/src/Omics.ts

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@@ -106,6 +106,11 @@ import {
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DeleteRunGroupCommandInput,
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DeleteRunGroupCommandOutput,
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} from "./commands/DeleteRunGroupCommand";
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import {
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DeleteS3AccessPolicyCommand,
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DeleteS3AccessPolicyCommandInput,
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DeleteS3AccessPolicyCommandOutput,
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} from "./commands/DeleteS3AccessPolicyCommand";
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import {
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DeleteSequenceStoreCommand,
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DeleteSequenceStoreCommandInput,
@@ -182,6 +187,11 @@ import { GetRunCacheCommand, GetRunCacheCommandInput, GetRunCacheCommandOutput }
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import { GetRunCommand, GetRunCommandInput, GetRunCommandOutput } from "./commands/GetRunCommand";
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import { GetRunGroupCommand, GetRunGroupCommandInput, GetRunGroupCommandOutput } from "./commands/GetRunGroupCommand";
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import { GetRunTaskCommand, GetRunTaskCommandInput, GetRunTaskCommandOutput } from "./commands/GetRunTaskCommand";
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import {
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GetS3AccessPolicyCommand,
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GetS3AccessPolicyCommandInput,
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GetS3AccessPolicyCommandOutput,
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} from "./commands/GetS3AccessPolicyCommand";
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import {
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GetSequenceStoreCommand,
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GetSequenceStoreCommandInput,
@@ -301,6 +311,11 @@ import {
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ListWorkflowsCommandInput,
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ListWorkflowsCommandOutput,
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} from "./commands/ListWorkflowsCommand";
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import {
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PutS3AccessPolicyCommand,
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PutS3AccessPolicyCommandInput,
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PutS3AccessPolicyCommandOutput,
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} from "./commands/PutS3AccessPolicyCommand";
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import {
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StartAnnotationImportJobCommand,
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StartAnnotationImportJobCommandInput,
@@ -358,6 +373,11 @@ import {
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UpdateRunGroupCommandInput,
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UpdateRunGroupCommandOutput,
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} from "./commands/UpdateRunGroupCommand";
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import {
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UpdateSequenceStoreCommand,
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UpdateSequenceStoreCommandInput,
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UpdateSequenceStoreCommandOutput,
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} from "./commands/UpdateSequenceStoreCommand";
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import {
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UpdateVariantStoreCommand,
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UpdateVariantStoreCommandInput,
@@ -400,6 +420,7 @@ const commands = {
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DeleteRunCommand,
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DeleteRunCacheCommand,
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DeleteRunGroupCommand,
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DeleteS3AccessPolicyCommand,
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DeleteSequenceStoreCommand,
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DeleteShareCommand,
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DeleteVariantStoreCommand,
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GetRunCacheCommand,
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GetRunGroupCommand,
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GetRunTaskCommand,
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GetS3AccessPolicyCommand,
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GetSequenceStoreCommand,
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GetShareCommand,
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GetVariantImportJobCommand,
@@ -447,6 +469,7 @@ const commands = {
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ListVariantImportJobsCommand,
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ListVariantStoresCommand,
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ListWorkflowsCommand,
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PutS3AccessPolicyCommand,
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StartAnnotationImportJobCommand,
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StartReadSetActivationJobCommand,
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StartReadSetExportJobCommand,
@@ -460,6 +483,7 @@ const commands = {
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UpdateAnnotationStoreVersionCommand,
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UpdateRunCacheCommand,
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UpdateRunGroupCommand,
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UpdateSequenceStoreCommand,
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UpdateVariantStoreCommand,
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UpdateWorkflowCommand,
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UploadReadSetPartCommand,
@@ -832,6 +856,23 @@ export interface Omics {
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cb: (err: any, data?: DeleteRunGroupCommandOutput) => void
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): void;
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859+
/**
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* @see {@link DeleteS3AccessPolicyCommand}
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*/
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deleteS3AccessPolicy(
863+
args: DeleteS3AccessPolicyCommandInput,
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options?: __HttpHandlerOptions
865+
): Promise<DeleteS3AccessPolicyCommandOutput>;
866+
deleteS3AccessPolicy(
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args: DeleteS3AccessPolicyCommandInput,
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cb: (err: any, data?: DeleteS3AccessPolicyCommandOutput) => void
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): void;
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deleteS3AccessPolicy(
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args: DeleteS3AccessPolicyCommandInput,
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options: __HttpHandlerOptions,
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cb: (err: any, data?: DeleteS3AccessPolicyCommandOutput) => void
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): void;
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/**
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* @see {@link DeleteSequenceStoreCommand}
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*/
@@ -1127,6 +1168,23 @@ export interface Omics {
11271168
cb: (err: any, data?: GetRunTaskCommandOutput) => void
11281169
): void;
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/**
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* @see {@link GetS3AccessPolicyCommand}
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*/
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getS3AccessPolicy(
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args: GetS3AccessPolicyCommandInput,
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options?: __HttpHandlerOptions
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): Promise<GetS3AccessPolicyCommandOutput>;
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getS3AccessPolicy(
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args: GetS3AccessPolicyCommandInput,
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cb: (err: any, data?: GetS3AccessPolicyCommandOutput) => void
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): void;
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getS3AccessPolicy(
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args: GetS3AccessPolicyCommandInput,
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options: __HttpHandlerOptions,
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cb: (err: any, data?: GetS3AccessPolicyCommandOutput) => void
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): void;
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/**
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* @see {@link GetSequenceStoreCommand}
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*/
@@ -1536,6 +1594,23 @@ export interface Omics {
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cb: (err: any, data?: ListWorkflowsCommandOutput) => void
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): void;
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/**
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* @see {@link PutS3AccessPolicyCommand}
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*/
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putS3AccessPolicy(
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args: PutS3AccessPolicyCommandInput,
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options?: __HttpHandlerOptions
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): Promise<PutS3AccessPolicyCommandOutput>;
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putS3AccessPolicy(
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args: PutS3AccessPolicyCommandInput,
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cb: (err: any, data?: PutS3AccessPolicyCommandOutput) => void
1607+
): void;
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putS3AccessPolicy(
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args: PutS3AccessPolicyCommandInput,
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options: __HttpHandlerOptions,
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cb: (err: any, data?: PutS3AccessPolicyCommandOutput) => void
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): void;
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/**
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* @see {@link StartAnnotationImportJobCommand}
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*/
@@ -1733,6 +1808,23 @@ export interface Omics {
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cb: (err: any, data?: UpdateRunGroupCommandOutput) => void
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): void;
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/**
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* @see {@link UpdateSequenceStoreCommand}
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*/
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updateSequenceStore(
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args: UpdateSequenceStoreCommandInput,
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options?: __HttpHandlerOptions
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): Promise<UpdateSequenceStoreCommandOutput>;
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updateSequenceStore(
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args: UpdateSequenceStoreCommandInput,
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cb: (err: any, data?: UpdateSequenceStoreCommandOutput) => void
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): void;
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updateSequenceStore(
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args: UpdateSequenceStoreCommandInput,
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options: __HttpHandlerOptions,
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cb: (err: any, data?: UpdateSequenceStoreCommandOutput) => void
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): void;
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/**
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* @see {@link UpdateVariantStoreCommand}
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*/

‎clients/client-omics/src/OmicsClient.ts

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@@ -114,6 +114,10 @@ import {
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import { DeleteRunCacheCommandInput, DeleteRunCacheCommandOutput } from "./commands/DeleteRunCacheCommand";
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import { DeleteRunCommandInput, DeleteRunCommandOutput } from "./commands/DeleteRunCommand";
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import { DeleteRunGroupCommandInput, DeleteRunGroupCommandOutput } from "./commands/DeleteRunGroupCommand";
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import {
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DeleteS3AccessPolicyCommandInput,
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DeleteS3AccessPolicyCommandOutput,
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} from "./commands/DeleteS3AccessPolicyCommand";
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import {
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DeleteSequenceStoreCommandInput,
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DeleteSequenceStoreCommandOutput,
@@ -158,6 +162,7 @@ import { GetRunCacheCommandInput, GetRunCacheCommandOutput } from "./commands/Ge
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import { GetRunCommandInput, GetRunCommandOutput } from "./commands/GetRunCommand";
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import { GetRunGroupCommandInput, GetRunGroupCommandOutput } from "./commands/GetRunGroupCommand";
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import { GetRunTaskCommandInput, GetRunTaskCommandOutput } from "./commands/GetRunTaskCommand";
165+
import { GetS3AccessPolicyCommandInput, GetS3AccessPolicyCommandOutput } from "./commands/GetS3AccessPolicyCommand";
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import { GetSequenceStoreCommandInput, GetSequenceStoreCommandOutput } from "./commands/GetSequenceStoreCommand";
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import { GetShareCommandInput, GetShareCommandOutput } from "./commands/GetShareCommand";
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import {
@@ -224,6 +229,7 @@ import {
224229
} from "./commands/ListVariantImportJobsCommand";
225230
import { ListVariantStoresCommandInput, ListVariantStoresCommandOutput } from "./commands/ListVariantStoresCommand";
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import { ListWorkflowsCommandInput, ListWorkflowsCommandOutput } from "./commands/ListWorkflowsCommand";
232+
import { PutS3AccessPolicyCommandInput, PutS3AccessPolicyCommandOutput } from "./commands/PutS3AccessPolicyCommand";
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import {
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StartAnnotationImportJobCommandInput,
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StartAnnotationImportJobCommandOutput,
@@ -261,6 +267,10 @@ import {
261267
} from "./commands/UpdateAnnotationStoreVersionCommand";
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import { UpdateRunCacheCommandInput, UpdateRunCacheCommandOutput } from "./commands/UpdateRunCacheCommand";
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import { UpdateRunGroupCommandInput, UpdateRunGroupCommandOutput } from "./commands/UpdateRunGroupCommand";
270+
import {
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UpdateSequenceStoreCommandInput,
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UpdateSequenceStoreCommandOutput,
273+
} from "./commands/UpdateSequenceStoreCommand";
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import { UpdateVariantStoreCommandInput, UpdateVariantStoreCommandOutput } from "./commands/UpdateVariantStoreCommand";
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import { UpdateWorkflowCommandInput, UpdateWorkflowCommandOutput } from "./commands/UpdateWorkflowCommand";
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import { UploadReadSetPartCommandInput, UploadReadSetPartCommandOutput } from "./commands/UploadReadSetPartCommand";
@@ -303,6 +313,7 @@ export type ServiceInputTypes =
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| DeleteRunCacheCommandInput
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| DeleteRunCommandInput
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| DeleteRunGroupCommandInput
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| DeleteS3AccessPolicyCommandInput
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| DeleteSequenceStoreCommandInput
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| DeleteShareCommandInput
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| DeleteVariantStoreCommandInput
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| GetRunCommandInput
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| GetRunGroupCommandInput
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| GetRunTaskCommandInput
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| GetS3AccessPolicyCommandInput
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| GetSequenceStoreCommandInput
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| GetShareCommandInput
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| GetVariantImportJobCommandInput
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| ListVariantImportJobsCommandInput
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| ListVariantStoresCommandInput
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| ListWorkflowsCommandInput
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| PutS3AccessPolicyCommandInput
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| StartAnnotationImportJobCommandInput
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| StartReadSetActivationJobCommandInput
355368
| StartReadSetExportJobCommandInput
@@ -363,6 +376,7 @@ export type ServiceInputTypes =
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| UpdateAnnotationStoreVersionCommandInput
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| UpdateRunCacheCommandInput
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| UpdateRunGroupCommandInput
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| UpdateSequenceStoreCommandInput
366380
| UpdateVariantStoreCommandInput
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| UpdateWorkflowCommandInput
368382
| UploadReadSetPartCommandInput;
@@ -395,6 +409,7 @@ export type ServiceOutputTypes =
395409
| DeleteRunCacheCommandOutput
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| DeleteRunCommandOutput
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| DeleteRunGroupCommandOutput
412+
| DeleteS3AccessPolicyCommandOutput
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| DeleteSequenceStoreCommandOutput
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| DeleteShareCommandOutput
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| DeleteVariantStoreCommandOutput
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| GetRunCommandOutput
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| GetRunGroupCommandOutput
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| GetRunTaskCommandOutput
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| GetS3AccessPolicyCommandOutput
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| GetSequenceStoreCommandOutput
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| GetShareCommandOutput
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| GetVariantImportJobCommandOutput
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442458
| ListVariantImportJobsCommandOutput
443459
| ListVariantStoresCommandOutput
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| ListWorkflowsCommandOutput
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| PutS3AccessPolicyCommandOutput
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| StartAnnotationImportJobCommandOutput
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| StartReadSetActivationJobCommandOutput
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| StartReadSetExportJobCommandOutput
@@ -455,6 +472,7 @@ export type ServiceOutputTypes =
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| UpdateAnnotationStoreVersionCommandOutput
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| UpdateRunCacheCommandOutput
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| UpdateRunGroupCommandOutput
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| UpdateSequenceStoreCommandOutput
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| UpdateVariantStoreCommandOutput
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| UpdateWorkflowCommandOutput
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| UploadReadSetPartCommandOutput;

‎clients/client-omics/src/commands/CreateSequenceStoreCommand.ts

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@@ -48,6 +48,12 @@ export interface CreateSequenceStoreCommandOutput extends CreateSequenceStoreRes
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* clientToken: "STRING_VALUE",
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* fallbackLocation: "STRING_VALUE",
5050
* eTagAlgorithmFamily: "STRING_VALUE",
51+
* propagatedSetLevelTags: [ // PropagatedSetLevelTags
52+
* "STRING_VALUE",
53+
* ],
54+
* s3AccessConfig: { // S3AccessConfig
55+
* accessLogLocation: "STRING_VALUE",
56+
* },
5157
* };
5258
* const command = new CreateSequenceStoreCommand(input);
5359
* const response = await client.send(command);
@@ -63,6 +69,16 @@ export interface CreateSequenceStoreCommandOutput extends CreateSequenceStoreRes
6369
* // creationTime: new Date("TIMESTAMP"), // required
6470
* // fallbackLocation: "STRING_VALUE",
6571
* // eTagAlgorithmFamily: "STRING_VALUE",
72+
* // status: "STRING_VALUE",
73+
* // statusMessage: "STRING_VALUE",
74+
* // propagatedSetLevelTags: [ // PropagatedSetLevelTags
75+
* // "STRING_VALUE",
76+
* // ],
77+
* // s3Access: { // SequenceStoreS3Access
78+
* // s3Uri: "STRING_VALUE",
79+
* // s3AccessPointArn: "STRING_VALUE",
80+
* // accessLogLocation: "STRING_VALUE",
81+
* // },
6682
* // };
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*
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* ```

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