From 6750409275e2fd1389a18985e0d111e469269c88 Mon Sep 17 00:00:00 2001
From: =?UTF-8?q?Jos=C3=A9=20Alarc=C3=B3n?= <jose.alarcon@varian.com>
Date: Mon, 25 Oct 2021 16:38:28 +0300
Subject: [PATCH] Add missing dependency to deepgrow notebook
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Add dependecy to `nibabel` to read `nii.gz` images.

Signed-off-by: José Alarcón <jose.alarcon@varian.com>
Suggested-by: Richard Brown <rich.brown@kcl.ac.uk>
---
 deepgrow/ignite/inference_3d.ipynb | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/deepgrow/ignite/inference_3d.ipynb b/deepgrow/ignite/inference_3d.ipynb
index 10d7752237..7750618327 100644
--- a/deepgrow/ignite/inference_3d.ipynb
+++ b/deepgrow/ignite/inference_3d.ipynb
@@ -6,7 +6,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "!python -c \"import monai\" || pip install -q \"monai-weekly[gdown, tqdm]\""
+    "!python -c \"import monai\" || pip install -q \"monai-weekly[gdown, nibabel, tqdm]\""
    ]
   },
   {