Add missing dependency to deepgrow notebook (#420)

melonipoika · web-flow · commit 6c8d367d1ee7 · 2021-10-25T15:37:32.000+01:00
Add dependecy to `nibabel` to read `nii.gz` images.

Signed-off-by: José Alarcón &lt;jose.alarcon@varian.com&gt;
Suggested-by: Richard Brown &lt;rich.brown@kcl.ac.uk&gt;
diff --git a/deepgrow/ignite/inference_3d.ipynb b/deepgrow/ignite/inference_3d.ipynb
@@ -6,7 +6,7 @@
    "metadata": {},
    "outputs": [],
    "source": [
-    "!python -c \"import monai\" || pip install -q \"monai-weekly[gdown, tqdm]\""
+    "!python -c \"import monai\" || pip install -q \"monai-weekly[gdown, nibabel, tqdm]\""
    ]
   },
   {

Original file line number	Diff line number	Diff line change
`@@ -6,7 +6,7 @@`
`6`	`6`	`"metadata": {},`
`7`	`7`	`"outputs": [],`
`8`	`8`	`"source": [`
`9`		`- "!python -c \"import monai\" \|\| pip install -q \"monai-weekly[gdown, tqdm]\""`
	`9`	`+ "!python -c \"import monai\" \|\| pip install -q \"monai-weekly[gdown, nibabel, tqdm]\""`
`10`	`10`	`]`
`11`	`11`	`},`
`12`	`12`	`{`